Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 SNORD115-27-201ENST00000364430 82 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 SNORD101-201ENST00000384027 73 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 Y_RNA.508-201ENST00000384502 114 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 MIR4696-201ENST00000581431 70 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 MIR3920-201ENST00000581751 86 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 MIR6828-201ENST00000636181 60 ntBASIC0.74□□□□□ -2.29
NPTX2P47972 RNU6-664P-201ENST00000362381 107 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 RNU6-633P-201ENST00000362612 103 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 RNU6-811P-201ENST00000384069 107 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 RNU6-762P-201ENST00000517107 102 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 MIR3064-201ENST00000581130 66 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 MIR4679-1-201ENST00000637619 75 ntBASIC0.73□□□□□ -2.29
NPTX2P47972 RNU6-509P-201ENST00000363519 107 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 RNU6-726P-201ENST00000364680 107 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 RNU6-497P-201ENST00000365316 104 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 SNORD115-44-201ENST00000365391 82 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 RNU6-716P-201ENST00000365621 103 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 RNU6-42P-201ENST00000384165 107 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 snoU13.18-201ENST00000459483 104 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 AC104996.3-201ENST00000590718 94 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
NPTX2P47972 Y_RNA.207-201ENST00000364142 106 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 MIR548U-201ENST00000390728 81 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 RNA5SP292-201ENST00000390974 118 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 SNORD41.1-201ENST00000391000 69 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 MIR548L-201ENST00000408303 86 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 RNU6-287P-201ENST00000516230 98 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 RNA5SP268-201ENST00000516828 124 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 MIR548AG2-201ENST00000581228 64 ntBASIC0.71□□□□□ -2.3
NPTX2P47972 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
NPTX2P47972 SNORD73B-201ENST00000364394 72 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 RNA5SP517-201ENST00000364724 117 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 RNU6-1126P-201ENST00000384002 107 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 MIR450A2-201ENST00000385022 100 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 MIR519C-201ENST00000385053 87 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 MIR1236-201ENST00000408340 102 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 RNA5SP227-201ENST00000516184 113 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.7□□□□□ -2.3
NPTX2P47972 MIR494-201ENST00000349529 81 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 Y_RNA.239-201ENST00000364444 113 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 SNORA8.2-201ENST00000384372 139 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 Y_RNA.491-201ENST00000384417 107 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
NPTX2P47972 MIR7107-201ENST00000611489 80 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 IGLL4P-201ENST00000614590 133 ntBASIC0.69□□□□□ -2.3
NPTX2P47972 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
NPTX2P47972 Y_RNA.73-201ENST00000362910 113 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 RNY1P1-201ENST00000364372 112 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 Y_RNA.355-201ENST00000365462 98 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 RNU6-935P-201ENST00000410371 100 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 MIR2113-201ENST00000459007 91 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 SNORA18.5-201ENST00000516616 101 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 AC062037.1-201ENST00000605302 128 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 AC092634.7-201ENST00000621022 103 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 MIR548BB-201ENST00000626714 66 ntBASIC0.68□□□□□ -2.3
NPTX2P47972 RNU7-153P-201ENST00000516455 62 ntBASIC0.67□□□□□ -2.3
NPTX2P47972 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
NPTX2P47972 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
NPTX2P47972 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.66□□□□□ -2.3
NPTX2P47972 Y_RNA.611-201ENST00000410682 108 ntBASIC0.66□□□□□ -2.3
NPTX2P47972 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
NPTX2P47972 SNORA25.18-201ENST00000607153 114 ntBASIC0.66□□□□□ -2.3
NPTX2P47972 MIR617-201ENST00000385030 97 ntBASIC0.65□□□□□ -2.31
NPTX2P47972 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
NPTX2P47972 RN7SKP12-201ENST00000516275 143 ntBASIC0.65□□□□□ -2.31
NPTX2P47972 MIR4796-201ENST00000580742 81 ntBASIC0.65□□□□□ -2.31
NPTX2P47972 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.65□□□□□ -2.31
NPTX2P47972 AL162376.1-201ENST00000624117 175 ntBASIC0.65□□□□□ -2.31
NPTX2P47972 MIR451A-201ENST00000385059 72 ntBASIC0.64□□□□□ -2.31
NPTX2P47972 MIR519E-201ENST00000385075 84 ntBASIC0.64□□□□□ -2.31
NPTX2P47972 RNU6-269P-201ENST00000391077 97 ntBASIC0.64□□□□□ -2.31
NPTX2P47972 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 RNU6-820P-201ENST00000384273 107 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 SNORD90-201ENST00000391145 111 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 RNY4P29-201ENST00000410801 97 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 RNU7-74P-201ENST00000459104 62 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 AC022137.1-201ENST00000483735 151 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 AC093729.1-201ENST00000513074 128 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 RNA5SP436-201ENST00000516020 115 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 RNU6-1057P-201ENST00000517162 102 ntBASIC0.63□□□□□ -2.31
NPTX2P47972 SNORD115-37-201ENST00000363768 82 ntBASIC0.62□□□□□ -2.31
NPTX2P47972 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
NPTX2P47972 MIR1302-4-201ENST00000408701 150 ntBASIC0.62□□□□□ -2.31
NPTX2P47972 MIR5588-201ENST00000581890 63 ntBASIC0.62□□□□□ -2.31
NPTX2P47972 MIR7111-201ENST00000619751 72 ntBASIC0.62□□□□□ -2.31
NPTX2P47972 AC006160.2-201ENST00000637708 154 ntBASIC0.62□□□□□ -2.31
NPTX2P47972 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
NPTX2P47972 RNU6-979P-201ENST00000383896 107 ntBASIC0.61□□□□□ -2.31
NPTX2P47972 MIR518A1-201ENST00000385068 85 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 356 ms