Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SNORA70.25-201ENST00000612741 95 ntBASIC0.17□□□□□ -2.38
APOBEC1P41238 MIR330-201ENST00000362196 94 ntBASIC0.16□□□□□ -2.38
APOBEC1P41238 Y_RNA.273-201ENST00000364703 102 ntBASIC0.16□□□□□ -2.38
APOBEC1P41238 RNU6-1081P-201ENST00000384537 107 ntBASIC0.16□□□□□ -2.38
APOBEC1P41238 Y_RNA.648-201ENST00000459455 110 ntBASIC0.16□□□□□ -2.38
APOBEC1P41238 RNU6-406P-201ENST00000516470 107 ntBASIC0.16□□□□□ -2.38
APOBEC1P41238 NAMPTP3-201ENST00000569273 224 ntBASIC0.16□□□□□ -2.38
APOBEC1P41238 RNA5SP325-201ENST00000363756 130 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 RNU6-1113P-201ENST00000384348 107 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 SNORD110-201ENST00000408189 75 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 RNA5SP484-201ENST00000458857 111 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 SCARNA23-201ENST00000516060 130 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 RNU6-904P-201ENST00000516206 101 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 RNU6-287P-201ENST00000516230 98 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 RNU6-589P-201ENST00000516485 107 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 uc_338.28-201ENST00000612082 187 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 AC025521.1-201ENST00000621624 286 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 U6.100-201ENST00000636230 99 ntBASIC0.15□□□□□ -2.39
APOBEC1P41238 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
APOBEC1P41238 Y_RNA.115-201ENST00000363272 98 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 Y_RNA.283-201ENST00000364798 112 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 MIR519E-201ENST00000385075 84 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 MIR1197-201ENST00000408818 88 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 MIR2113-201ENST00000459007 91 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 snoU13.11-201ENST00000459219 104 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.14□□□□□ -2.39
APOBEC1P41238 MIR548AG2-201ENST00000581228 64 ntBASIC0.14□□□□□ -2.39
APOBEC1P41238 Y_RNA.96-201ENST00000363092 109 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 RNU1-141P-201ENST00000364623 158 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 Y_RNA.467-201ENST00000384297 102 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 RNU6-644P-201ENST00000391155 98 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 RNU6-1232P-201ENST00000516299 86 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 RNU6-795P-201ENST00000516323 103 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 RNA5SP330-201ENST00000517096 96 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 AL513043.2-201ENST00000573941 143 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 MTRNR2L2-201ENST00000604882 87 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 AC103810.7-201ENST00000607821 91 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 MIR499B-201ENST00000636498 73 ntBASIC0.13□□□□□ -2.39
APOBEC1P41238 Y_RNA.207-201ENST00000364142 106 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 SNORD101-201ENST00000384027 73 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 SNORA51.5-201ENST00000384126 131 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 SNORA19.1-201ENST00000410656 129 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 RNU6-1057P-201ENST00000517162 102 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 MIR4777-201ENST00000583710 86 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 AC012531.4-201ENST00000616509 177 ntBASIC0.12□□□□□ -2.39
APOBEC1P41238 RNU6-664P-201ENST00000362381 107 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 SNORA42.1-201ENST00000363515 137 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 RNU6-652P-201ENST00000365488 107 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 RNU6-106P-201ENST00000384405 107 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 SNORA19-201ENST00000384737 128 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 MIR610-201ENST00000385139 96 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 Y_RNA.629-201ENST00000411368 105 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 RNU6-65P-201ENST00000516332 98 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 Y_RNA.705-201ENST00000516862 110 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 Y_RNA.709-201ENST00000516952 92 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 MIR4536-1-201ENST00000583537 88 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 AC023932.2-201ENST00000603176 175 ntBASIC0.11□□□□□ -2.39
APOBEC1P41238 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
APOBEC1P41238 RNA5SP457-201ENST00000363657 124 ntBASIC0.1□□□□□ -2.39
APOBEC1P41238 MIR501-201ENST00000390204 84 ntBASIC0.1□□□□□ -2.39
APOBEC1P41238 RNU6-554P-201ENST00000410466 106 ntBASIC0.1□□□□□ -2.39
APOBEC1P41238 MIR548AD-201ENST00000584780 82 ntBASIC0.1□□□□□ -2.39
APOBEC1P41238 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
APOBEC1P41238 Y_RNA.125-201ENST00000363371 111 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 Y_RNA.258-201ENST00000364613 105 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 RNU6-972P-201ENST00000391208 107 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 AC093423.1-201ENST00000440817 142 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 RNU6-782P-201ENST00000516852 104 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 MIR4460-201ENST00000577862 86 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 MIR4696-201ENST00000581431 70 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 MIR548Z-201ENST00000584743 97 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 AC069503.3-201ENST00000618674 145 ntBASIC0.09□□□□□ -2.4
APOBEC1P41238 Y_RNA.239-201ENST00000364444 113 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 RNU6-756P-201ENST00000383997 107 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 MIR590-201ENST00000385008 97 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 MIR216B-201ENST00000390186 82 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 MIR892B-201ENST00000401279 77 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 MIR548AI-201ENST00000579940 88 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 MIR4677-201ENST00000584153 80 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 AL109933.3-201ENST00000619095 188 ntBASIC0.08□□□□□ -2.4
APOBEC1P41238 RNU6-1325P-201ENST00000364905 105 ntBASIC0.07□□□□□ -2.4
APOBEC1P41238 Y_RNA.660-201ENST00000516002 120 ntBASIC0.07□□□□□ -2.4
APOBEC1P41238 Y_RNA.818-201ENST00000618813 71 ntBASIC0.07□□□□□ -2.4
APOBEC1P41238 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
APOBEC1P41238 RNU6-935P-201ENST00000410371 100 ntBASIC0.06□□□□□ -2.4
APOBEC1P41238 RNU6-887P-201ENST00000410660 100 ntBASIC0.06□□□□□ -2.4
APOBEC1P41238 HMGN2P22-201ENST00000427588 175 ntBASIC0.06□□□□□ -2.4
APOBEC1P41238 RNU6-75P-201ENST00000515944 104 ntBASIC0.06□□□□□ -2.4
APOBEC1P41238 SNORA25.13-201ENST00000516395 103 ntBASIC0.06□□□□□ -2.4
APOBEC1P41238 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms