Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 RNU6-1126P-201ENST00000384002 107 ntBASIC1.65□□□□□ -2.15
RFC5P40937 MIR573-201ENST00000384964 99 ntBASIC1.65□□□□□ -2.15
RFC5P40937 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
RFC5P40937 RNU2-59P-201ENST00000410482 191 ntBASIC1.65□□□□□ -2.15
RFC5P40937 RNU6-1052P-201ENST00000411398 104 ntBASIC1.65□□□□□ -2.15
RFC5P40937 AC004223.1-201ENST00000479840 271 ntBASIC1.65□□□□□ -2.15
RFC5P40937 AC097510.1-201ENST00000510945 133 ntBASIC1.65□□□□□ -2.15
RFC5P40937 RNU6-719P-201ENST00000516671 104 ntBASIC1.65□□□□□ -2.15
RFC5P40937 MIR3920-201ENST00000581751 86 ntBASIC1.65□□□□□ -2.15
RFC5P40937 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC5P40937 SCARNA18B-201ENST00000458806 135 ntBASIC1.64□□□□□ -2.15
RFC5P40937 RNU7-74P-201ENST00000459104 62 ntBASIC1.64□□□□□ -2.15
RFC5P40937 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.64□□□□□ -2.15
RFC5P40937 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
RFC5P40937 Y_RNA.371-201ENST00000365591 113 ntBASIC1.63□□□□□ -2.15
RFC5P40937 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RFC5P40937 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
RFC5P40937 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
RFC5P40937 MIR4484-201ENST00000582855 83 ntBASIC1.63□□□□□ -2.15
RFC5P40937 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
RFC5P40937 SNORA7.1-201ENST00000363750 139 ntBASIC1.62□□□□□ -2.15
RFC5P40937 SNORD28-201ENST00000384706 75 ntBASIC1.62□□□□□ -2.15
RFC5P40937 MIR617-201ENST00000385030 97 ntBASIC1.62□□□□□ -2.15
RFC5P40937 MIR618-201ENST00000385287 98 ntBASIC1.62□□□□□ -2.15
RFC5P40937 RNU7-95P-201ENST00000459222 64 ntBASIC1.62□□□□□ -2.15
RFC5P40937 Y_RNA.681-201ENST00000516445 113 ntBASIC1.62□□□□□ -2.15
RFC5P40937 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
RFC5P40937 AC244669.1-204ENST00000621564 178 ntBASIC1.62□□□□□ -2.15
RFC5P40937 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
RFC5P40937 RNU6-340P-201ENST00000364005 107 ntBASIC1.61□□□□□ -2.15
RFC5P40937 Y_RNA.338-201ENST00000365320 114 ntBASIC1.61□□□□□ -2.15
RFC5P40937 SNORA24B-201ENST00000384176 131 ntBASIC1.61□□□□□ -2.15
RFC5P40937 Y_RNA.532-201ENST00000384590 113 ntBASIC1.61□□□□□ -2.15
RFC5P40937 Y_RNA.565-201ENST00000384719 101 ntBASIC1.61□□□□□ -2.15
RFC5P40937 AC074348.1-201ENST00000426503 132 ntBASIC1.61□□□□□ -2.15
RFC5P40937 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
RFC5P40937 RNA5SP255-201ENST00000516370 107 ntBASIC1.61□□□□□ -2.15
RFC5P40937 MIR3612-201ENST00000579753 87 ntBASIC1.61□□□□□ -2.15
RFC5P40937 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
RFC5P40937 RNU6-411P-201ENST00000384451 107 ntBASIC1.6□□□□□ -2.15
RFC5P40937 MIR548L-201ENST00000408303 86 ntBASIC1.6□□□□□ -2.15
RFC5P40937 Y_RNA.606-201ENST00000410579 103 ntBASIC1.6□□□□□ -2.15
RFC5P40937 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.6□□□□□ -2.15
RFC5P40937 RNU6-1177P-201ENST00000391058 104 ntBASIC1.59□□□□□ -2.15
RFC5P40937 MIR4498-201ENST00000577599 66 ntBASIC1.59□□□□□ -2.15
RFC5P40937 MIR3678-201ENST00000578455 94 ntBASIC1.59□□□□□ -2.15
RFC5P40937 Y_RNA.788-201ENST00000622394 112 ntBASIC1.59□□□□□ -2.15
RFC5P40937 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.59□□□□□ -2.15
RFC5P40937 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RFC5P40937 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
RFC5P40937 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
RFC5P40937 MIR548AG2-201ENST00000581228 64 ntBASIC1.58□□□□□ -2.16
RFC5P40937 SNORD18A-201ENST00000363753 72 ntBASIC1.57□□□□□ -2.16
RFC5P40937 RNU6-1335P-201ENST00000365426 107 ntBASIC1.57□□□□□ -2.16
RFC5P40937 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
RFC5P40937 MIR3134-201ENST00000579433 74 ntBASIC1.57□□□□□ -2.16
RFC5P40937 U6.81-201ENST00000612550 106 ntBASIC1.57□□□□□ -2.16
RFC5P40937 Y_RNA.36-201ENST00000362602 112 ntBASIC1.56□□□□□ -2.16
RFC5P40937 RNU6-70P-201ENST00000516438 60 ntBASIC1.56□□□□□ -2.16
RFC5P40937 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RFC5P40937 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RFC5P40937 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RFC5P40937 RNU4-45P-201ENST00000365469 141 ntBASIC1.55□□□□□ -2.16
RFC5P40937 SNORA8.1-201ENST00000384250 140 ntBASIC1.55□□□□□ -2.16
RFC5P40937 SNORD41.1-201ENST00000391000 69 ntBASIC1.55□□□□□ -2.16
RFC5P40937 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
RFC5P40937 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
RFC5P40937 Y_RNA.676-201ENST00000516393 96 ntBASIC1.55□□□□□ -2.16
RFC5P40937 RNA5SP47-201ENST00000517230 109 ntBASIC1.55□□□□□ -2.16
RFC5P40937 MIR519E-201ENST00000385075 84 ntBASIC1.54□□□□□ -2.16
RFC5P40937 RNU6-824P-201ENST00000363724 104 ntBASIC1.53□□□□□ -2.16
RFC5P40937 SNORD99-201ENST00000408612 74 ntBASIC1.53□□□□□ -2.16
RFC5P40937 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.53□□□□□ -2.16
RFC5P40937 AC011195.1-201ENST00000578177 177 ntBASIC1.53□□□□□ -2.16
RFC5P40937 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
RFC5P40937 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.53□□□□□ -2.16
RFC5P40937 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RFC5P40937 MIR337-201ENST00000362281 93 ntBASIC1.52□□□□□ -2.17
RFC5P40937 RNU6-154P-201ENST00000384306 106 ntBASIC1.52□□□□□ -2.17
RFC5P40937 RNU6-274P-201ENST00000459566 107 ntBASIC1.52□□□□□ -2.17
RFC5P40937 RNU6-871P-201ENST00000516122 100 ntBASIC1.52□□□□□ -2.17
RFC5P40937 SCARNA16.5-201ENST00000517114 183 ntBASIC1.52□□□□□ -2.17
RFC5P40937 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
RFC5P40937 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.51□□□□□ -2.17
RFC5P40937 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.5□□□□□ -2.17
RFC5P40937 MIR4773-1-201ENST00000637203 78 ntBASIC1.5□□□□□ -2.17
RFC5P40937 RNU6-726P-201ENST00000364680 107 ntBASIC1.49□□□□□ -2.17
RFC5P40937 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RFC5P40937 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RFC5P40937 MIR18A-201ENST00000362310 71 ntBASIC1.48□□□□□ -2.17
RFC5P40937 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
RFC5P40937 AC244098.3-201ENST00000424803 96 ntBASIC1.48□□□□□ -2.17
RFC5P40937 RNU6-752P-201ENST00000516376 102 ntBASIC1.48□□□□□ -2.17
RFC5P40937 MIR3675-201ENST00000583661 73 ntBASIC1.48□□□□□ -2.17
RFC5P40937 MIR548O2-201ENST00000616090 70 ntBASIC1.48□□□□□ -2.17
RFC5P40937 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
RFC5P40937 RNU6-716P-201ENST00000365621 103 ntBASIC1.47□□□□□ -2.17
RFC5P40937 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
RFC5P40937 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
RFC5P40937 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms