Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Y_RNA.115-201ENST00000363272 98 ntBASIC0.68□□□□□ -2.3
KRT9P35527 RNU6-509P-201ENST00000363519 107 ntBASIC0.68□□□□□ -2.3
KRT9P35527 RNA5SP117-201ENST00000365294 118 ntBASIC0.68□□□□□ -2.3
KRT9P35527 RNU6-573P-201ENST00000383938 106 ntBASIC0.68□□□□□ -2.3
KRT9P35527 RNU6-291P-201ENST00000384720 107 ntBASIC0.68□□□□□ -2.3
KRT9P35527 MIR519C-201ENST00000385053 87 ntBASIC0.68□□□□□ -2.3
KRT9P35527 MIR519A1-201ENST00000385257 85 ntBASIC0.68□□□□□ -2.3
KRT9P35527 MIR1236-201ENST00000408340 102 ntBASIC0.68□□□□□ -2.3
KRT9P35527 Y_RNA.611-201ENST00000410682 108 ntBASIC0.68□□□□□ -2.3
KRT9P35527 snoU13.11-201ENST00000459219 104 ntBASIC0.68□□□□□ -2.3
KRT9P35527 AP003327.1-201ENST00000529684 127 ntBASIC0.68□□□□□ -2.3
KRT9P35527 Y_RNA.73-201ENST00000362910 113 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNU6-1260P-201ENST00000362944 107 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNU4-32P-201ENST00000363404 141 ntBASIC0.67□□□□□ -2.3
KRT9P35527 SNORD115-37-201ENST00000363768 82 ntBASIC0.67□□□□□ -2.3
KRT9P35527 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNU6-497P-201ENST00000365316 104 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
KRT9P35527 Y_RNA.426-201ENST00000384068 113 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNU6-1152P-201ENST00000384576 107 ntBASIC0.67□□□□□ -2.3
KRT9P35527 MIR599-201ENST00000385069 95 ntBASIC0.67□□□□□ -2.3
KRT9P35527 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
KRT9P35527 MIR1273G-201ENST00000577677 100 ntBASIC0.67□□□□□ -2.3
KRT9P35527 RNA5SP245-201ENST00000364239 121 ntBASIC0.66□□□□□ -2.3
KRT9P35527 Y_RNA.283-201ENST00000364798 112 ntBASIC0.66□□□□□ -2.3
KRT9P35527 RNU6-1276P-201ENST00000365372 104 ntBASIC0.66□□□□□ -2.3
KRT9P35527 RNU6-524P-201ENST00000384270 107 ntBASIC0.66□□□□□ -2.3
KRT9P35527 AC097635.1-201ENST00000450678 155 ntBASIC0.66□□□□□ -2.3
KRT9P35527 RNU7-85P-201ENST00000458851 63 ntBASIC0.66□□□□□ -2.3
KRT9P35527 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
KRT9P35527 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.66□□□□□ -2.3
KRT9P35527 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
KRT9P35527 MIR5588-201ENST00000581890 63 ntBASIC0.66□□□□□ -2.3
KRT9P35527 MIR548BB-201ENST00000626714 66 ntBASIC0.66□□□□□ -2.3
KRT9P35527 RNU6-957P-201ENST00000363652 99 ntBASIC0.65□□□□□ -2.31
KRT9P35527 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
KRT9P35527 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.31
KRT9P35527 RNU6-592P-201ENST00000411333 103 ntBASIC0.65□□□□□ -2.31
KRT9P35527 AC093729.1-201ENST00000513074 128 ntBASIC0.65□□□□□ -2.31
KRT9P35527 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
KRT9P35527 AC006160.2-201ENST00000637708 154 ntBASIC0.65□□□□□ -2.31
KRT9P35527 Y_RNA.221-201ENST00000364248 96 ntBASIC0.64□□□□□ -2.31
KRT9P35527 SNORD115-27-201ENST00000364430 82 ntBASIC0.64□□□□□ -2.31
KRT9P35527 RNU6-979P-201ENST00000383896 107 ntBASIC0.64□□□□□ -2.31
KRT9P35527 RNU6-811P-201ENST00000384069 107 ntBASIC0.64□□□□□ -2.31
KRT9P35527 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
KRT9P35527 MIR548U-201ENST00000390728 81 ntBASIC0.64□□□□□ -2.31
KRT9P35527 SNORA31.14-201ENST00000516728 116 ntBASIC0.64□□□□□ -2.31
KRT9P35527 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.64□□□□□ -2.31
KRT9P35527 MIR6513-201ENST00000621188 64 ntBASIC0.64□□□□□ -2.31
KRT9P35527 TRDV1-202ENST00000621643 102 ntBASIC0.64□□□□□ -2.31
KRT9P35527 uc_338.16-201ENST00000621804 95 ntBASIC0.64□□□□□ -2.31
KRT9P35527 MIR18A-201ENST00000362310 71 ntBASIC0.63□□□□□ -2.31
KRT9P35527 Y_RNA.219-201ENST00000364232 113 ntBASIC0.63□□□□□ -2.31
KRT9P35527 Y_RNA.258-201ENST00000364613 105 ntBASIC0.63□□□□□ -2.31
KRT9P35527 Y_RNA.607-201ENST00000410597 98 ntBASIC0.63□□□□□ -2.31
KRT9P35527 AC244505.6-201ENST00000452829 130 ntBASIC0.63□□□□□ -2.31
KRT9P35527 RNU7-171P-201ENST00000459581 62 ntBASIC0.63□□□□□ -2.31
KRT9P35527 AC002350.1-201ENST00000490759 375 ntBASIC0.63□□□□□ -2.31
KRT9P35527 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
KRT9P35527 RNA5SP330-201ENST00000517096 96 ntBASIC0.63□□□□□ -2.31
KRT9P35527 MIR1245B-201ENST00000636115 69 ntBASIC0.63□□□□□ -2.31
KRT9P35527 Y_RNA.32-201ENST00000362589 110 ntBASIC0.62□□□□□ -2.31
KRT9P35527 SNORD115-24-201ENST00000363528 82 ntBASIC0.62□□□□□ -2.31
KRT9P35527 Y_RNA.239-201ENST00000364444 113 ntBASIC0.62□□□□□ -2.31
KRT9P35527 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
KRT9P35527 Y_RNA.437-201ENST00000384113 113 ntBASIC0.62□□□□□ -2.31
KRT9P35527 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
KRT9P35527 RNU7-153P-201ENST00000516455 62 ntBASIC0.62□□□□□ -2.31
KRT9P35527 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
KRT9P35527 MIR3202-2-201ENST00000635980 79 ntBASIC0.62□□□□□ -2.31
KRT9P35527 MIRLET7F1-201ENST00000362202 87 ntBASIC0.61□□□□□ -2.31
KRT9P35527 SNORD114-23-201ENST00000363536 72 ntBASIC0.61□□□□□ -2.31
KRT9P35527 Y_RNA.178-201ENST00000363832 102 ntBASIC0.61□□□□□ -2.31
KRT9P35527 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
KRT9P35527 SNORD101-201ENST00000384027 73 ntBASIC0.61□□□□□ -2.31
KRT9P35527 MIR644A-201ENST00000385262 94 ntBASIC0.61□□□□□ -2.31
KRT9P35527 SNORD78.1-201ENST00000390866 65 ntBASIC0.61□□□□□ -2.31
KRT9P35527 Y_RNA.596-201ENST00000410462 109 ntBASIC0.61□□□□□ -2.31
KRT9P35527 RNU6-75P-201ENST00000515944 104 ntBASIC0.61□□□□□ -2.31
KRT9P35527 SNORA25.13-201ENST00000516395 103 ntBASIC0.61□□□□□ -2.31
KRT9P35527 SNORA18.5-201ENST00000516616 101 ntBASIC0.61□□□□□ -2.31
KRT9P35527 RNU6-135P-201ENST00000516769 101 ntBASIC0.61□□□□□ -2.31
KRT9P35527 AC104996.3-201ENST00000590718 94 ntBASIC0.61□□□□□ -2.31
KRT9P35527 RNU6-664P-201ENST00000362381 107 ntBASIC0.6□□□□□ -2.31
KRT9P35527 RNU6-1124P-201ENST00000384169 107 ntBASIC0.6□□□□□ -2.31
KRT9P35527 Y_RNA.491-201ENST00000384417 107 ntBASIC0.6□□□□□ -2.31
KRT9P35527 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
KRT9P35527 RNA5SP193-201ENST00000410353 107 ntBASIC0.6□□□□□ -2.31
KRT9P35527 MIR4796-201ENST00000580742 81 ntBASIC0.6□□□□□ -2.31
KRT9P35527 MIR3064-201ENST00000581130 66 ntBASIC0.6□□□□□ -2.31
KRT9P35527 RNU6-1229P-201ENST00000364295 107 ntBASIC0.59□□□□□ -2.31
KRT9P35527 RNU6-652P-201ENST00000365488 107 ntBASIC0.59□□□□□ -2.31
KRT9P35527 RNU6-132P-201ENST00000383863 107 ntBASIC0.59□□□□□ -2.31
KRT9P35527 RNA5SP292-201ENST00000390974 118 ntBASIC0.59□□□□□ -2.31
KRT9P35527 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
KRT9P35527 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.59□□□□□ -2.31
KRT9P35527 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms