Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU6-905P-201ENST00000384434 107 ntBASIC0.66□□□□□ -2.3
VAMP1P23763 MIR617-201ENST00000385030 97 ntBASIC0.66□□□□□ -2.3
VAMP1P23763 RNU7-85P-201ENST00000458851 63 ntBASIC0.66□□□□□ -2.3
VAMP1P23763 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
VAMP1P23763 RNU6-863P-201ENST00000515989 104 ntBASIC0.66□□□□□ -2.3
VAMP1P23763 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
VAMP1P23763 Y_RNA.207-201ENST00000364142 106 ntBASIC0.65□□□□□ -2.31
VAMP1P23763 RNU6-811P-201ENST00000384069 107 ntBASIC0.65□□□□□ -2.31
VAMP1P23763 RNU6-269P-201ENST00000391077 97 ntBASIC0.65□□□□□ -2.31
VAMP1P23763 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
VAMP1P23763 RNU6-935P-201ENST00000410371 100 ntBASIC0.65□□□□□ -2.31
VAMP1P23763 MIR4696-201ENST00000581431 70 ntBASIC0.65□□□□□ -2.31
VAMP1P23763 MIRLET7F1-201ENST00000362202 87 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 RNU6-640P-201ENST00000363693 105 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 MIR532-201ENST00000385025 91 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 SNORA68.3-201ENST00000515906 83 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 AC026421.1-201ENST00000519101 163 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 MIR151B-201ENST00000584249 96 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 AL162376.1-201ENST00000624117 175 ntBASIC0.64□□□□□ -2.31
VAMP1P23763 SNORA2A-201ENST00000383885 135 ntBASIC0.63□□□□□ -2.31
VAMP1P23763 MTATP6P29-201ENST00000415057 132 ntBASIC0.63□□□□□ -2.31
VAMP1P23763 AC006210.1-201ENST00000424882 111 ntBASIC0.63□□□□□ -2.31
VAMP1P23763 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
VAMP1P23763 MIR6788-201ENST00000618842 66 ntBASIC0.63□□□□□ -2.31
VAMP1P23763 MIR216B-201ENST00000390186 82 ntBASIC0.62□□□□□ -2.31
VAMP1P23763 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
VAMP1P23763 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.62□□□□□ -2.31
VAMP1P23763 RNU6-75P-201ENST00000515944 104 ntBASIC0.62□□□□□ -2.31
VAMP1P23763 Y_RNA.694-201ENST00000516677 117 ntBASIC0.62□□□□□ -2.31
VAMP1P23763 MIR4752-201ENST00000579672 72 ntBASIC0.62□□□□□ -2.31
VAMP1P23763 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
VAMP1P23763 SNORD114-22-201ENST00000365423 72 ntBASIC0.61□□□□□ -2.31
VAMP1P23763 RNU7-129P-201ENST00000516128 62 ntBASIC0.61□□□□□ -2.31
VAMP1P23763 U7.6-201ENST00000610841 64 ntBASIC0.61□□□□□ -2.31
VAMP1P23763 RNU1-93P-201ENST00000364704 169 ntBASIC0.6□□□□□ -2.31
VAMP1P23763 SNORD116-22-201ENST00000384430 92 ntBASIC0.6□□□□□ -2.31
VAMP1P23763 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
VAMP1P23763 NAMPTP3-201ENST00000569273 224 ntBASIC0.6□□□□□ -2.31
VAMP1P23763 MIR3973-201ENST00000579824 107 ntBASIC0.6□□□□□ -2.31
VAMP1P23763 MIR7111-201ENST00000619751 72 ntBASIC0.6□□□□□ -2.31
VAMP1P23763 MIRLET7D-201ENST00000362263 87 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 RNU6-1134P-201ENST00000365156 101 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 RNY1P4-201ENST00000384595 115 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 MIR598-201ENST00000384868 97 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 SNORD110-201ENST00000408189 75 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 MIR5000-201ENST00000577717 103 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 MIR4460-201ENST00000577862 86 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 AC104996.3-201ENST00000590718 94 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
VAMP1P23763 SNORD44.1-201ENST00000363202 61 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 RNU6-1131P-201ENST00000364955 107 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 Y_RNA.491-201ENST00000384417 107 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 MIR451A-201ENST00000385059 72 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 MIR519E-201ENST00000385075 84 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 AC073261.1-201ENST00000429409 121 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 RNA5SP484-201ENST00000458857 111 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 MTRNR2L2-201ENST00000604882 87 ntBASIC0.58□□□□□ -2.32
VAMP1P23763 Y_RNA.36-201ENST00000362602 112 ntBASIC0.57□□□□□ -2.32
VAMP1P23763 MIR760-201ENST00000390220 80 ntBASIC0.57□□□□□ -2.32
VAMP1P23763 MIR1236-201ENST00000408340 102 ntBASIC0.57□□□□□ -2.32
VAMP1P23763 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
VAMP1P23763 RNA5SP62-201ENST00000363457 110 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 SNORD114-26-201ENST00000363543 72 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 RNY4P3-201ENST00000365254 95 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 MIR488-201ENST00000365739 83 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 FGF7P7-201ENST00000514120 227 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 MIR5706-201ENST00000579841 80 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 MIR3064-201ENST00000581130 66 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 MIR548AG2-201ENST00000581228 64 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.56□□□□□ -2.32
VAMP1P23763 AC090625.1-201ENST00000357130 210 ntBASIC0.55□□□□□ -2.32
VAMP1P23763 SNORD115-37-201ENST00000363768 82 ntBASIC0.55□□□□□ -2.32
VAMP1P23763 RNU1-141P-201ENST00000364623 158 ntBASIC0.55□□□□□ -2.32
VAMP1P23763 MIR489-201ENST00000384923 84 ntBASIC0.55□□□□□ -2.32
VAMP1P23763 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
VAMP1P23763 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
VAMP1P23763 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
VAMP1P23763 MIR103A1-201ENST00000362165 78 ntBASIC0.54□□□□□ -2.32
VAMP1P23763 RNU6-132P-201ENST00000383863 107 ntBASIC0.54□□□□□ -2.32
VAMP1P23763 RNY1P7-201ENST00000384743 110 ntBASIC0.54□□□□□ -2.32
VAMP1P23763 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
VAMP1P23763 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
VAMP1P23763 MIR4668-201ENST00000582284 70 ntBASIC0.54□□□□□ -2.32
VAMP1P23763 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
VAMP1P23763 CYP3A137P-201ENST00000562436 69 ntBASIC0.53□□□□□ -2.32
VAMP1P23763 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
VAMP1P23763 SNORA9.1-201ENST00000362412 131 ntBASIC0.52□□□□□ -2.33
VAMP1P23763 RNU6-848P-201ENST00000515948 107 ntBASIC0.52□□□□□ -2.33
VAMP1P23763 RNU6-617P-201ENST00000516147 107 ntBASIC0.52□□□□□ -2.33
VAMP1P23763 RNU6-473P-201ENST00000516164 107 ntBASIC0.52□□□□□ -2.33
VAMP1P23763 RNU6-1049P-201ENST00000516414 107 ntBASIC0.52□□□□□ -2.33
VAMP1P23763 MIR519C-201ENST00000385053 87 ntBASIC0.51□□□□□ -2.33
VAMP1P23763 SNORA18.5-201ENST00000516616 101 ntBASIC0.51□□□□□ -2.33
VAMP1P23763 SNORA70.25-201ENST00000612741 95 ntBASIC0.51□□□□□ -2.33
VAMP1P23763 MIR6835-201ENST00000621552 64 ntBASIC0.51□□□□□ -2.33
VAMP1P23763 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
VAMP1P23763 U3.27-201ENST00000391237 200 ntBASIC0.5□□□□□ -2.33
VAMP1P23763 RNU6-1052P-201ENST00000411398 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms