Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
HOXD8P13378 MIR517C-201ENST00000385103 95 ntBASIC1.74□□□□□ -2.13
HOXD8P13378 RNA5SP102-201ENST00000516865 106 ntBASIC1.74□□□□□ -2.13
HOXD8P13378 MIR4696-201ENST00000581431 70 ntBASIC1.74□□□□□ -2.13
HOXD8P13378 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.74□□□□□ -2.13
HOXD8P13378 Y_RNA.207-201ENST00000364142 106 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 RNU1-123P-201ENST00000458950 160 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 RNA5SP220-201ENST00000516298 104 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 AC008608.1-201ENST00000603910 127 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.73□□□□□ -2.13
HOXD8P13378 Y_RNA.371-201ENST00000365591 113 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 RNU6-154P-201ENST00000384306 106 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 MIR520F-201ENST00000384824 87 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 RNU6-935P-201ENST00000410371 100 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 AC097510.1-201ENST00000510945 133 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 SNORA70.22-201ENST00000517160 124 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 MIR4804-201ENST00000581683 73 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 MIR3675-201ENST00000583661 73 ntBASIC1.72□□□□□ -2.13
HOXD8P13378 RNA5SP245-201ENST00000364239 121 ntBASIC1.71□□□□□ -2.14
HOXD8P13378 SNORD114-22-201ENST00000365423 72 ntBASIC1.71□□□□□ -2.14
HOXD8P13378 RNU6-895P-201ENST00000384125 103 ntBASIC1.71□□□□□ -2.14
HOXD8P13378 RNU6-987P-201ENST00000384759 104 ntBASIC1.71□□□□□ -2.14
HOXD8P13378 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
HOXD8P13378 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXD8P13378 SNORA25.4-201ENST00000363666 124 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 MIR451A-201ENST00000385059 72 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 SNORD79.1-201ENST00000516069 84 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 AL078603.1-201ENST00000603824 313 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 MTRNR2L2-201ENST00000604882 87 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 AC022709.1-201ENST00000615967 87 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 MIR6734-201ENST00000621166 68 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 MIR664A-201ENST00000626086 82 ntBASIC1.7□□□□□ -2.14
HOXD8P13378 SNORA24B-201ENST00000384176 131 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 RNU6-1052P-201ENST00000411398 104 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 RNU6-752P-201ENST00000516376 102 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 RNU6-719P-201ENST00000516671 104 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 SNORA31.24-201ENST00000517232 57 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 MIR3140-201ENST00000583685 90 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 AC103706.3-201ENST00000636297 85 ntBASIC1.69□□□□□ -2.14
HOXD8P13378 U3.27-201ENST00000391237 200 ntBASIC1.68□□□□□ -2.14
HOXD8P13378 RNU4-37P-201ENST00000410214 84 ntBASIC1.68□□□□□ -2.14
HOXD8P13378 snoU13.17-201ENST00000458802 104 ntBASIC1.68□□□□□ -2.14
HOXD8P13378 AC005520.4-201ENST00000604337 90 ntBASIC1.68□□□□□ -2.14
HOXD8P13378 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.68□□□□□ -2.14
HOXD8P13378 SNORD115-31-201ENST00000365318 82 ntBASIC1.67□□□□□ -2.14
HOXD8P13378 MIR4421-201ENST00000578133 69 ntBASIC1.67□□□□□ -2.14
HOXD8P13378 U6.81-201ENST00000612550 106 ntBASIC1.67□□□□□ -2.14
HOXD8P13378 PVT1_3.1-201ENST00000620853 95 ntBASIC1.67□□□□□ -2.14
HOXD8P13378 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
HOXD8P13378 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXD8P13378 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
HOXD8P13378 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HOXD8P13378 RNU6-630P-201ENST00000391258 106 ntBASIC1.66□□□□□ -2.14
HOXD8P13378 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXD8P13378 RNU6-1265P-201ENST00000516342 103 ntBASIC1.66□□□□□ -2.14
HOXD8P13378 RNU7-13P-201ENST00000516413 62 ntBASIC1.66□□□□□ -2.14
HOXD8P13378 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.66□□□□□ -2.14
HOXD8P13378 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HOXD8P13378 Y_RNA.374-201ENST00000365606 101 ntBASIC1.65□□□□□ -2.15
HOXD8P13378 Y_RNA.443-201ENST00000384135 111 ntBASIC1.65□□□□□ -2.15
HOXD8P13378 MTND4LP19-201ENST00000403051 166 ntBASIC1.65□□□□□ -2.15
HOXD8P13378 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HOXD8P13378 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HOXD8P13378 SNORA7.1-201ENST00000363750 139 ntBASIC1.64□□□□□ -2.15
HOXD8P13378 Y_RNA.174-201ENST00000363781 105 ntBASIC1.64□□□□□ -2.15
HOXD8P13378 RNU6-499P-201ENST00000365615 107 ntBASIC1.64□□□□□ -2.15
HOXD8P13378 MIR216B-201ENST00000390186 82 ntBASIC1.64□□□□□ -2.15
HOXD8P13378 AC244505.6-201ENST00000452829 130 ntBASIC1.64□□□□□ -2.15
HOXD8P13378 RNU7-56P-201ENST00000458744 62 ntBASIC1.64□□□□□ -2.15
HOXD8P13378 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HOXD8P13378 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HOXD8P13378 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
HOXD8P13378 Y_RNA.32-201ENST00000362589 110 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 SNORD115-24-201ENST00000363528 82 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 SNORD115-44-201ENST00000365391 82 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 RNU6-669P-201ENST00000365575 107 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 SNORA31.14-201ENST00000516728 116 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 MIR4511-201ENST00000582784 87 ntBASIC1.63□□□□□ -2.15
HOXD8P13378 RNU6-369P-201ENST00000362515 102 ntBASIC1.62□□□□□ -2.15
HOXD8P13378 RNU6-1216P-201ENST00000362590 107 ntBASIC1.62□□□□□ -2.15
HOXD8P13378 RNU6-330P-201ENST00000363015 107 ntBASIC1.62□□□□□ -2.15
HOXD8P13378 RNU6-881P-201ENST00000516813 102 ntBASIC1.62□□□□□ -2.15
HOXD8P13378 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.62□□□□□ -2.15
HOXD8P13378 MIR6515-201ENST00000619843 57 ntBASIC1.62□□□□□ -2.15
HOXD8P13378 MIR96-201ENST00000362288 78 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 SNORD45.1-201ENST00000363181 77 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 SNORD12-201ENST00000391002 90 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 MIR1827-201ENST00000408549 66 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 RNU7-104P-201ENST00000459398 79 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 RNU6-274P-201ENST00000459566 107 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 RNU6-287P-201ENST00000516230 98 ntBASIC1.61□□□□□ -2.15
HOXD8P13378 AL136317.1-201ENST00000612653 226 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms