Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNA5SP205-201ENST00000364653 136 ntBASIC-0.5□□□□□ -2.49
VIMP08670 SNORD114-29-201ENST00000364819 70 ntBASIC-0.5□□□□□ -2.49
VIMP08670 RNU6-154P-201ENST00000384306 106 ntBASIC-0.5□□□□□ -2.49
VIMP08670 snosnR66.1-201ENST00000391095 99 ntBASIC-0.5□□□□□ -2.49
VIMP08670 RNA5SP451-201ENST00000410588 110 ntBASIC-0.5□□□□□ -2.49
VIMP08670 MIR655-201ENST00000362159 97 ntBASIC-0.51□□□□□ -2.49
VIMP08670 RNA5SP98-201ENST00000363158 137 ntBASIC-0.51□□□□□ -2.49
VIMP08670 RNA5SP457-201ENST00000363657 124 ntBASIC-0.51□□□□□ -2.49
VIMP08670 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.51□□□□□ -2.49
VIMP08670 RNU6-466P-201ENST00000391224 103 ntBASIC-0.51□□□□□ -2.49
VIMP08670 MTND4LP9-201ENST00000427694 174 ntBASIC-0.51□□□□□ -2.49
VIMP08670 RNA5SP285-201ENST00000516619 119 ntBASIC-0.51□□□□□ -2.49
VIMP08670 AC096720.1-201ENST00000604441 183 ntBASIC-0.51□□□□□ -2.49
VIMP08670 MIR101-1-201ENST00000362265 75 ntBASIC-0.52□□□□□ -2.49
VIMP08670 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.52□□□□□ -2.49
VIMP08670 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.52□□□□□ -2.49
VIMP08670 MIR1912-201ENST00000410389 80 ntBASIC-0.52□□□□□ -2.49
VIMP08670 MIR6759-201ENST00000638110 65 ntBASIC-0.52□□□□□ -2.49
VIMP08670 SNORD101-201ENST00000384027 73 ntBASIC-0.53□□□□□ -2.49
VIMP08670 RNU6-480P-201ENST00000384332 107 ntBASIC-0.53□□□□□ -2.49
VIMP08670 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.53□□□□□ -2.49
VIMP08670 snoU13.11-201ENST00000459219 104 ntBASIC-0.53□□□□□ -2.49
VIMP08670 AC114755.3-201ENST00000481111 251 ntBASIC-0.53□□□□□ -2.49
VIMP08670 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.54□□□□□ -2.5
VIMP08670 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.54□□□□□ -2.5
VIMP08670 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.54□□□□□ -2.5
VIMP08670 RNU6-175P-201ENST00000516896 107 ntBASIC-0.54□□□□□ -2.5
VIMP08670 MIR4432-201ENST00000581823 84 ntBASIC-0.54□□□□□ -2.5
VIMP08670 AL590491.3-201ENST00000610731 82 ntBASIC-0.54□□□□□ -2.5
VIMP08670 AL391099.1-201ENST00000624635 187 ntBASIC-0.54□□□□□ -2.5
VIMP08670 RNU6-664P-201ENST00000362381 107 ntBASIC-0.55□□□□□ -2.5
VIMP08670 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.55□□□□□ -2.5
VIMP08670 MIR539-201ENST00000365690 78 ntBASIC-0.55□□□□□ -2.5
VIMP08670 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.55□□□□□ -2.5
VIMP08670 RNU6-772P-201ENST00000516042 105 ntBASIC-0.55□□□□□ -2.5
VIMP08670 RNU7-200P-201ENST00000516105 62 ntBASIC-0.55□□□□□ -2.5
VIMP08670 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.55□□□□□ -2.5
VIMP08670 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.55□□□□□ -2.5
VIMP08670 AC007012.1-201ENST00000567192 175 ntBASIC-0.55□□□□□ -2.5
VIMP08670 MIR4696-201ENST00000581431 70 ntBASIC-0.55□□□□□ -2.5
VIMP08670 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.55□□□□□ -2.5
VIMP08670 RNA5SP257-201ENST00000363023 116 ntBASIC-0.56□□□□□ -2.5
VIMP08670 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.56□□□□□ -2.5
VIMP08670 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.56□□□□□ -2.5
VIMP08670 SNORA40-201ENST00000388090 126 ntBASIC-0.56□□□□□ -2.5
VIMP08670 RNA5SP66-201ENST00000517178 101 ntBASIC-0.56□□□□□ -2.5
VIMP08670 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.57□□□□□ -2.5
VIMP08670 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.57□□□□□ -2.5
VIMP08670 MIR224-201ENST00000384889 81 ntBASIC-0.57□□□□□ -2.5
VIMP08670 MIR577-201ENST00000385196 96 ntBASIC-0.57□□□□□ -2.5
VIMP08670 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
VIMP08670 MIR4493-201ENST00000584016 73 ntBASIC-0.57□□□□□ -2.5
VIMP08670 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.58□□□□□ -2.5
VIMP08670 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.58□□□□□ -2.5
VIMP08670 RNU6-455P-201ENST00000384681 107 ntBASIC-0.58□□□□□ -2.5
VIMP08670 RNU6-257P-201ENST00000410238 98 ntBASIC-0.58□□□□□ -2.5
VIMP08670 MIR5589-201ENST00000579442 60 ntBASIC-0.58□□□□□ -2.5
VIMP08670 AC090425.1-201ENST00000610007 140 ntBASIC-0.58□□□□□ -2.5
VIMP08670 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.58□□□□□ -2.5
VIMP08670 AL157777.2-201ENST00000258070 137 ntBASIC-0.59□□□□□ -2.5
VIMP08670 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.59□□□□□ -2.5
VIMP08670 MIR604-201ENST00000384880 94 ntBASIC-0.59□□□□□ -2.5
VIMP08670 MIR216B-201ENST00000390186 82 ntBASIC-0.59□□□□□ -2.5
VIMP08670 AL035470.1-201ENST00000622571 220 ntBASIC-0.59□□□□□ -2.5
VIMP08670 MIR20A-201ENST00000362279 71 ntBASIC-0.6□□□□□ -2.51
VIMP08670 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.6□□□□□ -2.51
VIMP08670 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.6□□□□□ -2.51
VIMP08670 MIR652-201ENST00000385278 98 ntBASIC-0.6□□□□□ -2.51
VIMP08670 AL445193.1-201ENST00000441183 141 ntBASIC-0.6□□□□□ -2.51
VIMP08670 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.6□□□□□ -2.51
VIMP08670 MIR4694-201ENST00000578534 80 ntBASIC-0.6□□□□□ -2.51
VIMP08670 MIR3681-201ENST00000580089 72 ntBASIC-0.6□□□□□ -2.51
VIMP08670 MIR4802-201ENST00000581881 80 ntBASIC-0.6□□□□□ -2.51
VIMP08670 MIR4436A-201ENST00000585278 85 ntBASIC-0.6□□□□□ -2.51
VIMP08670 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.61□□□□□ -2.51
VIMP08670 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.61□□□□□ -2.51
VIMP08670 RNU6-935P-201ENST00000410371 100 ntBASIC-0.61□□□□□ -2.51
VIMP08670 AP000676.1-201ENST00000533307 52 ntBASIC-0.61□□□□□ -2.51
VIMP08670 MIR4679-2-201ENST00000578358 77 ntBASIC-0.61□□□□□ -2.51
VIMP08670 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.61□□□□□ -2.51
VIMP08670 MIR548O2-201ENST00000616090 70 ntBASIC-0.61□□□□□ -2.51
VIMP08670 AC093726.3-201ENST00000637588 150 ntBASIC-0.61□□□□□ -2.51
VIMP08670 SNORD114-14-201ENST00000362723 75 ntBASIC-0.62□□□□□ -2.51
VIMP08670 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.62□□□□□ -2.51
VIMP08670 MT-TQ-201ENST00000387372 72 ntBASIC-0.62□□□□□ -2.51
VIMP08670 RNU4-63P-201ENST00000411313 118 ntBASIC-0.62□□□□□ -2.51
VIMP08670 RNU7-107P-201ENST00000459121 61 ntBASIC-0.62□□□□□ -2.51
VIMP08670 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.62□□□□□ -2.51
VIMP08670 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.62□□□□□ -2.51
VIMP08670 RNA5SP480-201ENST00000516840 109 ntBASIC-0.62□□□□□ -2.51
VIMP08670 RNU6-86P-201ENST00000606534 107 ntBASIC-0.62□□□□□ -2.51
VIMP08670 AC025521.1-201ENST00000621624 286 ntBASIC-0.62□□□□□ -2.51
VIMP08670 RNU6-832P-201ENST00000363319 107 ntBASIC-0.63□□□□□ -2.51
VIMP08670 SNORA3B-201ENST00000391305 131 ntBASIC-0.63□□□□□ -2.51
VIMP08670 AC244090.1-201ENST00000441884 93 ntBASIC-0.63□□□□□ -2.51
VIMP08670 RNU6-346P-201ENST00000516288 111 ntBASIC-0.63□□□□□ -2.51
VIMP08670 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.63□□□□□ -2.51
VIMP08670 RNA5SP169-201ENST00000517268 117 ntBASIC-0.63□□□□□ -2.51
VIMP08670 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.64□□□□□ -2.51
VIMP08670 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms