Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC093423.1-201ENST00000440817 142 ntBASIC1.91□□□□□ -2.1
PTCD1O75127 RNU7-21P-201ENST00000459430 62 ntBASIC1.91□□□□□ -2.1
PTCD1O75127 RNU6-1265P-201ENST00000516342 103 ntBASIC1.91□□□□□ -2.1
PTCD1O75127 MIR548H5-201ENST00000580314 60 ntBASIC1.91□□□□□ -2.1
PTCD1O75127 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
PTCD1O75127 AC106800.4-201ENST00000614905 153 ntBASIC1.91□□□□□ -2.1
PTCD1O75127 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTCD1O75127 Y_RNA.56-201ENST00000362798 112 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 SNORD113.1-201ENST00000363280 73 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 Y_RNA.224-201ENST00000364308 111 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 RNU6-895P-201ENST00000384125 103 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 MIR1304-201ENST00000408243 91 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 RNU6-994P-201ENST00000410507 111 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 AC097510.1-201ENST00000510945 133 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
PTCD1O75127 RNY4P3-201ENST00000365254 95 ntBASIC1.89□□□□□ -2.11
PTCD1O75127 MIR633-201ENST00000384821 98 ntBASIC1.89□□□□□ -2.11
PTCD1O75127 MIR599-201ENST00000385069 95 ntBASIC1.89□□□□□ -2.11
PTCD1O75127 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.89□□□□□ -2.11
PTCD1O75127 RNU7-90P-201ENST00000459216 62 ntBASIC1.89□□□□□ -2.11
PTCD1O75127 RNU6-935P-201ENST00000410371 100 ntBASIC1.88□□□□□ -2.11
PTCD1O75127 AC097635.1-201ENST00000450678 155 ntBASIC1.88□□□□□ -2.11
PTCD1O75127 RNU7-40P-201ENST00000516397 64 ntBASIC1.88□□□□□ -2.11
PTCD1O75127 SNORA70.22-201ENST00000517160 124 ntBASIC1.88□□□□□ -2.11
PTCD1O75127 AL353770.2-201ENST00000620024 78 ntBASIC1.88□□□□□ -2.11
PTCD1O75127 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PTCD1O75127 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTCD1O75127 RNA5SP363-201ENST00000365072 115 ntBASIC1.87□□□□□ -2.11
PTCD1O75127 RNU6-382P-201ENST00000365181 106 ntBASIC1.87□□□□□ -2.11
PTCD1O75127 MIR125B2-201ENST00000385128 89 ntBASIC1.87□□□□□ -2.11
PTCD1O75127 SNORD79.1-201ENST00000516069 84 ntBASIC1.87□□□□□ -2.11
PTCD1O75127 RNU6-982P-201ENST00000516216 102 ntBASIC1.87□□□□□ -2.11
PTCD1O75127 MIR6504-201ENST00000613520 61 ntBASIC1.87□□□□□ -2.11
PTCD1O75127 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.86□□□□□ -2.11
PTCD1O75127 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PTCD1O75127 MIR222-201ENST00000384992 110 ntBASIC1.86□□□□□ -2.11
PTCD1O75127 RPS26P5-201ENST00000418544 335 ntBASIC1.86□□□□□ -2.11
PTCD1O75127 MIR4511-201ENST00000582784 87 ntBASIC1.86□□□□□ -2.11
PTCD1O75127 MIR4773-1-201ENST00000637203 78 ntBASIC1.86□□□□□ -2.11
PTCD1O75127 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PTCD1O75127 MIR489-201ENST00000384923 84 ntBASIC1.85□□□□□ -2.11
PTCD1O75127 RNU1-123P-201ENST00000458950 160 ntBASIC1.85□□□□□ -2.11
PTCD1O75127 MIR4676-201ENST00000583078 72 ntBASIC1.85□□□□□ -2.11
PTCD1O75127 RNU6-1216P-201ENST00000362590 107 ntBASIC1.84□□□□□ -2.11
PTCD1O75127 AC110620.1-201ENST00000416042 228 ntBASIC1.84□□□□□ -2.11
PTCD1O75127 RNA5SP102-201ENST00000516865 106 ntBASIC1.84□□□□□ -2.11
PTCD1O75127 RNU7-10P-201ENST00000607194 63 ntBASIC1.84□□□□□ -2.11
PTCD1O75127 RNU6-1187P-201ENST00000364771 110 ntBASIC1.83□□□□□ -2.12
PTCD1O75127 RNU6-364P-201ENST00000384387 107 ntBASIC1.83□□□□□ -2.12
PTCD1O75127 RNU6-1177P-201ENST00000391058 104 ntBASIC1.83□□□□□ -2.12
PTCD1O75127 RNU6-765P-201ENST00000516916 99 ntBASIC1.83□□□□□ -2.12
PTCD1O75127 MIR8053-201ENST00000613344 75 ntBASIC1.83□□□□□ -2.12
PTCD1O75127 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTCD1O75127 MIR100-201ENST00000385259 80 ntBASIC1.82□□□□□ -2.12
PTCD1O75127 SNORA40.6-201ENST00000391153 128 ntBASIC1.82□□□□□ -2.12
PTCD1O75127 RNU6-287P-201ENST00000516230 98 ntBASIC1.82□□□□□ -2.12
PTCD1O75127 AC079150.2-201ENST00000443733 78 ntBASIC1.81□□□□□ -2.12
PTCD1O75127 MIR548AG2-201ENST00000581228 64 ntBASIC1.81□□□□□ -2.12
PTCD1O75127 RNU6-535P-201ENST00000384722 107 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 MIR938-201ENST00000401216 83 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.8□□□□□ -2.12
PTCD1O75127 RNU6-977P-201ENST00000516411 103 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 AC138907.6-201ENST00000568401 126 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 AC138869.1-201ENST00000568623 124 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 AC103706.3-201ENST00000636297 85 ntBASIC1.8□□□□□ -2.12
PTCD1O75127 RNU6-369P-201ENST00000362515 102 ntBASIC1.79□□□□□ -2.12
PTCD1O75127 AC244098.3-201ENST00000424803 96 ntBASIC1.79□□□□□ -2.12
PTCD1O75127 AC067940.1-201ENST00000458411 300 ntBASIC1.79□□□□□ -2.12
PTCD1O75127 AC008608.1-201ENST00000603910 127 ntBASIC1.79□□□□□ -2.12
PTCD1O75127 AC027335.2-201ENST00000624030 375 ntBASIC1.79□□□□□ -2.12
PTCD1O75127 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PTCD1O75127 MIR1-1-201ENST00000362147 71 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 RNA5SP327-201ENST00000362494 101 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 RNU6-669P-201ENST00000365575 107 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 MIR320A-201ENST00000385302 82 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 RNU6-141P-201ENST00000410499 105 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 NAMPTP3-201ENST00000569273 224 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 MIR4452-201ENST00000583004 71 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 AL078603.1-201ENST00000603824 313 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.78□□□□□ -2.12
PTCD1O75127 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PTCD1O75127 SNORD114-22-201ENST00000365423 72 ntBASIC1.77□□□□□ -2.13
PTCD1O75127 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
PTCD1O75127 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.77□□□□□ -2.13
PTCD1O75127 RNU7-102P-201ENST00000458948 62 ntBASIC1.77□□□□□ -2.13
PTCD1O75127 RNU6-274P-201ENST00000459566 107 ntBASIC1.77□□□□□ -2.13
PTCD1O75127 SNORA25-201ENST00000384384 134 ntBASIC1.76□□□□□ -2.13
PTCD1O75127 MIR203A-201ENST00000384836 110 ntBASIC1.76□□□□□ -2.13
PTCD1O75127 AC244505.6-201ENST00000452829 130 ntBASIC1.76□□□□□ -2.13
PTCD1O75127 MIR6078-201ENST00000611069 100 ntBASIC1.76□□□□□ -2.13
PTCD1O75127 MIR96-201ENST00000362288 78 ntBASIC1.75□□□□□ -2.13
PTCD1O75127 MIR520F-201ENST00000384824 87 ntBASIC1.75□□□□□ -2.13
PTCD1O75127 AC002429.1-201ENST00000437672 148 ntBASIC1.75□□□□□ -2.13
PTCD1O75127 MIR4804-201ENST00000581683 73 ntBASIC1.75□□□□□ -2.13
PTCD1O75127 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
PTCD1O75127 RNU6-829P-201ENST00000363700 112 ntBASIC1.74□□□□□ -2.13
PTCD1O75127 RNU1-119P-201ENST00000391122 165 ntBASIC1.74□□□□□ -2.13
PTCD1O75127 snoU13.18-201ENST00000459483 104 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms