Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
NPHS1O60500 RNU6-161P-201ENST00000363051 106 ntBASIC1.09□□□□□ -2.23
NPHS1O60500 AC244098.3-201ENST00000424803 96 ntBASIC1.09□□□□□ -2.23
NPHS1O60500 RNU6-1108P-201ENST00000516308 104 ntBASIC1.09□□□□□ -2.23
NPHS1O60500 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
NPHS1O60500 Y_RNA.164-201ENST00000363709 102 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 SNORD115-44-201ENST00000365391 82 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
NPHS1O60500 MIR2113-201ENST00000459007 91 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 MIR4498-201ENST00000577599 66 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 MIR548AG2-201ENST00000581228 64 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 MIR3140-201ENST00000583685 90 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 MIR4639-201ENST00000584938 69 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.08□□□□□ -2.24
NPHS1O60500 MIR451A-201ENST00000385059 72 ntBASIC1.07□□□□□ -2.24
NPHS1O60500 RNU6-1052P-201ENST00000411398 104 ntBASIC1.07□□□□□ -2.24
NPHS1O60500 FGF7P7-201ENST00000514120 227 ntBASIC1.07□□□□□ -2.24
NPHS1O60500 RNU6-719P-201ENST00000516671 104 ntBASIC1.07□□□□□ -2.24
NPHS1O60500 AC067863.3-201ENST00000624172 122 ntBASIC1.07□□□□□ -2.24
NPHS1O60500 RNU6-1229P-201ENST00000364295 107 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 RNU6-1126P-201ENST00000384002 107 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 snoU13.17-201ENST00000458802 104 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 TRMT112P2-201ENST00000512910 132 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 RNU6-557P-201ENST00000516842 110 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 RNA5SP47-201ENST00000517230 109 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHS1O60500 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
NPHS1O60500 MIR18A-201ENST00000362310 71 ntBASIC1.05□□□□□ -2.24
NPHS1O60500 RNU6-315P-201ENST00000362666 107 ntBASIC1.05□□□□□ -2.24
NPHS1O60500 Y_RNA.244-201ENST00000364484 109 ntBASIC1.05□□□□□ -2.24
NPHS1O60500 RNU6-1057P-201ENST00000517162 102 ntBASIC1.05□□□□□ -2.24
NPHS1O60500 Y_RNA.327-201ENST00000365201 102 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 RNU6-24P-201ENST00000384440 107 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 SNORD77.2-201ENST00000391045 68 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
NPHS1O60500 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NPHS1O60500 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
NPHS1O60500 MIRLET7A1-201ENST00000362295 80 ntBASIC1.03□□□□□ -2.24
NPHS1O60500 RNU6-208P-201ENST00000362431 107 ntBASIC1.03□□□□□ -2.24
NPHS1O60500 RNU6-686P-201ENST00000364839 107 ntBASIC1.03□□□□□ -2.24
NPHS1O60500 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
NPHS1O60500 Y_RNA.660-201ENST00000516002 120 ntBASIC1.03□□□□□ -2.24
NPHS1O60500 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NPHS1O60500 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
NPHS1O60500 RNU5F-1-201ENST00000362507 117 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 SNORA25.9-201ENST00000365087 128 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 RNY4P3-201ENST00000365254 95 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 RNU6-716P-201ENST00000365621 103 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 RNA5SP222-201ENST00000411039 105 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 Y_RNA.676-201ENST00000516393 96 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
NPHS1O60500 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.02□□□□□ -2.25
NPHS1O60500 MIR617-201ENST00000385030 97 ntBASIC1.01□□□□□ -2.25
NPHS1O60500 MIR548L-201ENST00000408303 86 ntBASIC1.01□□□□□ -2.25
NPHS1O60500 SCARNA16.5-201ENST00000517114 183 ntBASIC1.01□□□□□ -2.25
NPHS1O60500 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.01□□□□□ -2.25
NPHS1O60500 RNU6-726P-201ENST00000364680 107 ntBASIC1□□□□□ -2.25
NPHS1O60500 SNORA24B-201ENST00000384176 131 ntBASIC1□□□□□ -2.25
NPHS1O60500 MIR519E-201ENST00000385075 84 ntBASIC1□□□□□ -2.25
NPHS1O60500 SNORD41.1-201ENST00000391000 69 ntBASIC1□□□□□ -2.25
NPHS1O60500 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
NPHS1O60500 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1□□□□□ -2.25
NPHS1O60500 RNU6-321P-201ENST00000410912 106 ntBASIC0.99□□□□□ -2.25
NPHS1O60500 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
NPHS1O60500 Y_RNA.264-201ENST00000364665 102 ntBASIC0.98□□□□□ -2.25
NPHS1O60500 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
NPHS1O60500 RNY1P8-201ENST00000383970 114 ntBASIC0.98□□□□□ -2.25
NPHS1O60500 U3.27-201ENST00000391237 200 ntBASIC0.98□□□□□ -2.25
NPHS1O60500 RNU6-1094P-201ENST00000362416 104 ntBASIC0.97□□□□□ -2.25
NPHS1O60500 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
NPHS1O60500 Y_RNA.532-201ENST00000384590 113 ntBASIC0.97□□□□□ -2.25
NPHS1O60500 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
NPHS1O60500 RNA5SP94-201ENST00000516917 108 ntBASIC0.97□□□□□ -2.25
NPHS1O60500 MIR6828-201ENST00000636181 60 ntBASIC0.97□□□□□ -2.25
NPHS1O60500 Y_RNA.12-201ENST00000362393 112 ntBASIC0.96□□□□□ -2.26
NPHS1O60500 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
NPHS1O60500 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
NPHS1O60500 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
NPHS1O60500 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.96□□□□□ -2.26
NPHS1O60500 SNORA36.2-201ENST00000384004 127 ntBASIC0.95□□□□□ -2.26
NPHS1O60500 RNU6-380P-201ENST00000410207 107 ntBASIC0.95□□□□□ -2.26
NPHS1O60500 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
NPHS1O60500 RNA5SP227-201ENST00000516184 113 ntBASIC0.95□□□□□ -2.26
NPHS1O60500 YWHAEP2-201ENST00000580066 112 ntBASIC0.95□□□□□ -2.26
NPHS1O60500 YWHAEP3-201ENST00000582767 121 ntBASIC0.95□□□□□ -2.26
NPHS1O60500 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
NPHS1O60500 RNU6-392P-201ENST00000364926 101 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 Y_RNA.371-201ENST00000365591 113 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 RNU6-269P-201ENST00000391077 97 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 RNU7-74P-201ENST00000459104 62 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 RNA5SP268-201ENST00000516828 124 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 MIR4484-201ENST00000582855 83 ntBASIC0.94□□□□□ -2.26
NPHS1O60500 RNU6-824P-201ENST00000363724 104 ntBASIC0.93□□□□□ -2.26
NPHS1O60500 RNU6-1177P-201ENST00000391058 104 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms