Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNA5SP436-201ENST00000516020 115 ntBASIC1.54□□□□□ -2.16
RFXAPO00287 AL512310.8-201ENST00000550183 120 ntBASIC1.54□□□□□ -2.16
RFXAPO00287 MIR3937-201ENST00000580135 106 ntBASIC1.54□□□□□ -2.16
RFXAPO00287 U6.81-201ENST00000612550 106 ntBASIC1.54□□□□□ -2.16
RFXAPO00287 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFXAPO00287 Y_RNA.374-201ENST00000365606 101 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 MIR9-2-201ENST00000384838 87 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 MIR934-201ENST00000401241 83 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 RNU6-765P-201ENST00000516916 99 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 MIR4676-201ENST00000583078 72 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 AC005520.4-201ENST00000604337 90 ntBASIC1.53□□□□□ -2.16
RFXAPO00287 SNORD113.3-201ENST00000364630 78 ntBASIC1.52□□□□□ -2.17
RFXAPO00287 RNU6-535P-201ENST00000384722 107 ntBASIC1.52□□□□□ -2.17
RFXAPO00287 RNU6-935P-201ENST00000410371 100 ntBASIC1.52□□□□□ -2.17
RFXAPO00287 SNORA31.2-201ENST00000516019 134 ntBASIC1.52□□□□□ -2.17
RFXAPO00287 RNU7-10P-201ENST00000607194 63 ntBASIC1.52□□□□□ -2.17
RFXAPO00287 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RFXAPO00287 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.52□□□□□ -2.17
RFXAPO00287 SNORD115-22-201ENST00000364456 82 ntBASIC1.51□□□□□ -2.17
RFXAPO00287 MIR598-201ENST00000384868 97 ntBASIC1.51□□□□□ -2.17
RFXAPO00287 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RFXAPO00287 Y_RNA.606-201ENST00000410579 103 ntBASIC1.51□□□□□ -2.17
RFXAPO00287 AL109933.3-201ENST00000619095 188 ntBASIC1.51□□□□□ -2.17
RFXAPO00287 RNU6-604P-201ENST00000390917 100 ntBASIC1.5□□□□□ -2.17
RFXAPO00287 RNU2-59P-201ENST00000410482 191 ntBASIC1.5□□□□□ -2.17
RFXAPO00287 Y_RNA.32-201ENST00000362589 110 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 RPS26P5-201ENST00000418544 335 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 RNU7-102P-201ENST00000458948 62 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 RNU6-287P-201ENST00000516230 98 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 AC138907.6-201ENST00000568401 126 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 AC138869.1-201ENST00000568623 124 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 MIR548AG2-201ENST00000581228 64 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 MIR3675-201ENST00000583661 73 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 MIR4773-1-201ENST00000637203 78 ntBASIC1.49□□□□□ -2.17
RFXAPO00287 SNORD45.1-201ENST00000363181 77 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 RNU6-382P-201ENST00000365181 106 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 RNY4P3-201ENST00000365254 95 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 SNORD116-24-201ENST00000384549 92 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 MIR548J-201ENST00000408833 112 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.48□□□□□ -2.17
RFXAPO00287 AC097510.1-201ENST00000510945 133 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 RNU6-881P-201ENST00000516813 102 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 AC106800.4-201ENST00000614905 153 ntBASIC1.48□□□□□ -2.17
RFXAPO00287 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RFXAPO00287 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 RNU6-630P-201ENST00000391258 106 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
RFXAPO00287 RNU6-364P-201ENST00000384387 107 ntBASIC1.46□□□□□ -2.18
RFXAPO00287 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
RFXAPO00287 AC244505.6-201ENST00000452829 130 ntBASIC1.46□□□□□ -2.18
RFXAPO00287 MIR6788-201ENST00000618842 66 ntBASIC1.46□□□□□ -2.18
RFXAPO00287 AC027335.2-201ENST00000624030 375 ntBASIC1.46□□□□□ -2.18
RFXAPO00287 RNU6-471P-201ENST00000383944 106 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 Y_RNA.443-201ENST00000384135 111 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 RNU6-1177P-201ENST00000391058 104 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 RNU7-21P-201ENST00000459430 62 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 SNORA31.14-201ENST00000516728 116 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 MIR4804-201ENST00000581683 73 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.45□□□□□ -2.18
RFXAPO00287 RNU6-895P-201ENST00000384125 103 ntBASIC1.44□□□□□ -2.18
RFXAPO00287 MIR938-201ENST00000401216 83 ntBASIC1.44□□□□□ -2.18
RFXAPO00287 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
RFXAPO00287 RNU6-982P-201ENST00000516216 102 ntBASIC1.44□□□□□ -2.18
RFXAPO00287 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
RFXAPO00287 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
RFXAPO00287 SNORD113.1-201ENST00000363280 73 ntBASIC1.43□□□□□ -2.18
RFXAPO00287 RNU6-681P-201ENST00000364012 104 ntBASIC1.43□□□□□ -2.18
RFXAPO00287 RNU6-910P-201ENST00000390844 107 ntBASIC1.43□□□□□ -2.18
RFXAPO00287 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
RFXAPO00287 RNU7-161P-201ENST00000517289 62 ntBASIC1.43□□□□□ -2.18
RFXAPO00287 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
RFXAPO00287 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RFXAPO00287 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
RFXAPO00287 RNU7-56P-201ENST00000458744 62 ntBASIC1.42□□□□□ -2.18
RFXAPO00287 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.42□□□□□ -2.18
RFXAPO00287 NAMPTP3-201ENST00000569273 224 ntBASIC1.42□□□□□ -2.18
RFXAPO00287 uc_338.16-201ENST00000621804 95 ntBASIC1.42□□□□□ -2.18
RFXAPO00287 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RFXAPO00287 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.41□□□□□ -2.18
RFXAPO00287 RNU6-994P-201ENST00000410507 111 ntBASIC1.41□□□□□ -2.18
RFXAPO00287 AC244098.3-201ENST00000424803 96 ntBASIC1.41□□□□□ -2.18
RFXAPO00287 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
RFXAPO00287 SNORD115-24-201ENST00000363528 82 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 RNA5SP403-201ENST00000363598 108 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 SNORA25.4-201ENST00000363666 124 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 RNU6-1126P-201ENST00000384002 107 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 MIR203A-201ENST00000384836 110 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 RNU6-977P-201ENST00000516411 103 ntBASIC1.4□□□□□ -2.19
RFXAPO00287 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 331.2 ms