Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
IGHV4-28A0A0C4DH34 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
IGHV4-28A0A0C4DH34 SNORD115-44-201ENST00000365391 82 ntBASIC0.46□□□□□ -2.34
IGHV4-28A0A0C4DH34 SNORD101-201ENST00000384027 73 ntBASIC0.46□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR489-201ENST00000384923 84 ntBASIC0.46□□□□□ -2.34
IGHV4-28A0A0C4DH34 Y_RNA.609-201ENST00000410669 89 ntBASIC0.46□□□□□ -2.34
IGHV4-28A0A0C4DH34 AC069271.1-201ENST00000445577 156 ntBASIC0.46□□□□□ -2.34
IGHV4-28A0A0C4DH34 SNORD4B-201ENST00000459083 72 ntBASIC0.46□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU6-1126P-201ENST00000384002 107 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU6-269P-201ENST00000391077 97 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU6-287P-201ENST00000516230 98 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 AC026421.1-201ENST00000519101 163 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR4696-201ENST00000581431 70 ntBASIC0.45□□□□□ -2.34
IGHV4-28A0A0C4DH34 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIRLET7F1-201ENST00000362202 87 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU6-664P-201ENST00000362381 107 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR4752-201ENST00000579672 72 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 MTRNR2L2-201ENST00000604882 87 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR7111-201ENST00000619751 72 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 AL162376.1-201ENST00000624117 175 ntBASIC0.44□□□□□ -2.34
IGHV4-28A0A0C4DH34 Y_RNA.207-201ENST00000364142 106 ntBASIC0.43□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR2113-201ENST00000459007 91 ntBASIC0.43□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
IGHV4-28A0A0C4DH34 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.43□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 Y_RNA.220-201ENST00000364244 109 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU6-132P-201ENST00000383863 107 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNY1P7-201ENST00000384743 110 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR598-201ENST00000384868 97 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNY4P30-201ENST00000410216 95 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU7-74P-201ENST00000459104 62 ntBASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.42□□□□□ -2.34
IGHV4-28A0A0C4DH34 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU4-32P-201ENST00000363404 141 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 Y_RNA.239-201ENST00000364444 113 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU6-1131P-201ENST00000364955 107 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR617-201ENST00000385030 97 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR519E-201ENST00000385075 84 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR92A1-201ENST00000385233 78 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 RNU2-59P-201ENST00000410482 191 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 uc_338.17-201ENST00000619633 179 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
IGHV4-28A0A0C4DH34 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.34
IGHV4-28A0A0C4DH34 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
IGHV4-28A0A0C4DH34 Y_RNA.423-201ENST00000384057 113 ntBASIC0.4□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-811P-201ENST00000384069 107 ntBASIC0.4□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.4□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR3064-201ENST00000581130 66 ntBASIC0.4□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-509P-201ENST00000363519 107 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-49P-201ENST00000384256 107 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR548U-201ENST00000390728 81 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-935P-201ENST00000410371 100 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNA5SP484-201ENST00000458857 111 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-1057P-201ENST00000517162 102 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 AC104996.3-201ENST00000590718 94 ntBASIC0.39□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNY1P4-201ENST00000384595 115 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 MTATP6P29-201ENST00000415057 132 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 Y_RNA.694-201ENST00000516677 117 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 NAMPTP3-201ENST00000569273 224 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 SNORA70.25-201ENST00000612741 95 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 PVT1_3.1-201ENST00000620853 95 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 AC073869.9-201ENST00000641610 120 ntBASIC0.38□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR451A-201ENST00000385059 72 ntBASIC0.37□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNA5SP292-201ENST00000390974 118 ntBASIC0.37□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR4668-201ENST00000582284 70 ntBASIC0.37□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU1-29P-201ENST00000606574 126 ntBASIC0.37□□□□□ -2.35
IGHV4-28A0A0C4DH34 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU1-141P-201ENST00000364623 158 ntBASIC0.36□□□□□ -2.35
IGHV4-28A0A0C4DH34 Y_RNA.491-201ENST00000384417 107 ntBASIC0.36□□□□□ -2.35
IGHV4-28A0A0C4DH34 AL157398.1-201ENST00000452981 186 ntBASIC0.36□□□□□ -2.35
IGHV4-28A0A0C4DH34 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.36□□□□□ -2.35
IGHV4-28A0A0C4DH34 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
IGHV4-28A0A0C4DH34 SNORA2A-201ENST00000383885 135 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 SNORD116-22-201ENST00000384430 92 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 MIR936-201ENST00000401264 98 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 AC006210.1-201ENST00000424882 111 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 RNU6-844P-201ENST00000517175 102 ntBASIC0.35□□□□□ -2.35
IGHV4-28A0A0C4DH34 SNORD115-27-201ENST00000364430 82 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 RNU6-1134P-201ENST00000365156 101 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 SNORD110-201ENST00000408189 75 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 RNU6-402P-201ENST00000410678 103 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 AC093423.1-201ENST00000440817 142 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 FGF7P7-201ENST00000514120 227 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 SNORA18.5-201ENST00000516616 101 ntBASIC0.34□□□□□ -2.36
IGHV4-28A0A0C4DH34 MIR4460-201ENST00000577862 86 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms