Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRDV1-202ENST00000621643 102 ntBASIC1.07□□□□□ -2.24
CCDC187A0A096LP49 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC187A0A096LP49 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 MIR548U-201ENST00000390728 81 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 MIR1257-201ENST00000408490 117 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 MIR548J-201ENST00000408833 112 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 RPS26P5-201ENST00000418544 335 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 AC097635.1-201ENST00000450678 155 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 Y_RNA.809-201ENST00000516058 95 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 MIR548H5-201ENST00000580314 60 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 U6.100-201ENST00000636230 99 ntBASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC187A0A096LP49 MIR1-1-201ENST00000362147 71 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 RNA5SP245-201ENST00000364239 121 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 SNORA24B-201ENST00000384176 131 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 MIR942-201ENST00000401111 86 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 Y_RNA.697-201ENST00000516776 113 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 MIR4771-2-201ENST00000577758 74 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 MIR4696-201ENST00000581431 70 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 MIR4771-1-201ENST00000582617 74 ntBASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC187A0A096LP49 MIR101-2-201ENST00000362195 79 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 RNU6-1051P-201ENST00000365471 102 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 RNU6-291P-201ENST00000384720 107 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 MIR1827-201ENST00000408549 66 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 AC114801.3-201ENST00000510231 177 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 RNU6-687P-201ENST00000516443 89 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 MIR4676-201ENST00000583078 72 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 RNU7-10P-201ENST00000607194 63 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 AL136317.1-201ENST00000612653 226 ntBASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC187A0A096LP49 RNU6-664P-201ENST00000362381 107 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 RNU6-208P-201ENST00000362431 107 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 Y_RNA.264-201ENST00000364665 102 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 MIR2113-201ENST00000459007 91 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 U7.7-201ENST00000459276 60 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 RNU6-303P-201ENST00000517091 106 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 RNU6-1015P-201ENST00000517121 99 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
CCDC187A0A096LP49 MIR598-201ENST00000384868 97 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 MIR599-201ENST00000385069 95 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 MIR100-201ENST00000385259 80 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 AC244505.6-201ENST00000452829 130 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 RNU7-156P-201ENST00000517214 74 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 AC008608.1-201ENST00000603910 127 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 MIR1297-201ENST00000637311 77 ntBASIC1.02□□□□□ -2.25
CCDC187A0A096LP49 SNORD101-201ENST00000384027 73 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 RNU6-411P-201ENST00000384451 107 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 AC138907.6-201ENST00000568401 126 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 AC138869.1-201ENST00000568623 124 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 MIR4484-201ENST00000582855 83 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 MIR3140-201ENST00000583685 90 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 MIR664A-201ENST00000626086 82 ntBASIC1.01□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.12-201ENST00000362393 112 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.36-201ENST00000362602 112 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 SNORD114-26-201ENST00000363543 72 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.207-201ENST00000364142 106 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 RNU7-56P-201ENST00000458744 62 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 RNU6-977P-201ENST00000516411 103 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 RNU6-539P-201ENST00000516665 103 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 YWHAEP2-201ENST00000580066 112 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 MIR4804-201ENST00000581683 73 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 YWHAEP3-201ENST00000582767 121 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 DLEU2_3.1-201ENST00000620005 73 ntBASIC1□□□□□ -2.25
CCDC187A0A096LP49 RNU6-330P-201ENST00000363015 107 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.239-201ENST00000364444 113 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 RNU6-380P-201ENST00000410207 107 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.596-201ENST00000410462 109 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.606-201ENST00000410579 103 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 RNU7-102P-201ENST00000458948 62 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 RNU6-634P-201ENST00000459134 106 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 RNA5SP255-201ENST00000516370 107 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 U6.81-201ENST00000612550 106 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 uc_338.16-201ENST00000621804 95 ntBASIC0.99□□□□□ -2.25
CCDC187A0A096LP49 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU5F-1-201ENST00000362507 117 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU6-340P-201ENST00000364005 107 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU6-590P-201ENST00000365039 107 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.386-201ENST00000383913 105 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU6-154P-201ENST00000384306 106 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU6-535P-201ENST00000384722 107 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 MIR938-201ENST00000401216 83 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU6-935P-201ENST00000410371 100 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 RNU6-807P-201ENST00000516805 107 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 AC025627.3-201ENST00000582078 182 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
CCDC187A0A096LP49 Y_RNA.32-201ENST00000362589 110 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms