Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 MIR938-201ENST00000401216 83 ntBASIC2.91□□□□□ -1.94
CCDC61Q9Y6R9 SUMO1P4-201ENST00000429430 302 ntBASIC2.91□□□□□ -1.94
CCDC61Q9Y6R9 AC027335.2-201ENST00000624030 375 ntBASIC2.91□□□□□ -1.94
CCDC61Q9Y6R9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
CCDC61Q9Y6R9 MIR6073-201ENST00000352083 89 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 SNORD115-24-201ENST00000363528 82 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 SNORA6-201ENST00000384033 151 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 MIR630-201ENST00000384957 97 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 SNORD113-2-201ENST00000391082 72 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 RPS26P5-201ENST00000418544 335 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 RNU6-295P-201ENST00000516901 104 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 AL353997.5-201ENST00000618886 171 ntBASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC61Q9Y6R9 RNA5SP403-201ENST00000363598 108 ntBASIC2.89□□□□□ -1.95
CCDC61Q9Y6R9 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
CCDC61Q9Y6R9 AC025033.1-201ENST00000463883 194 ntBASIC2.89□□□□□ -1.95
CCDC61Q9Y6R9 RNU6-548P-201ENST00000517083 115 ntBASIC2.89□□□□□ -1.95
CCDC61Q9Y6R9 MIR548AD-201ENST00000584780 82 ntBASIC2.89□□□□□ -1.95
CCDC61Q9Y6R9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC61Q9Y6R9 DEFA7P-201ENST00000382676 285 ntBASIC2.88□□□□□ -1.95
CCDC61Q9Y6R9 RNU6-1162P-201ENST00000384443 104 ntBASIC2.88□□□□□ -1.95
CCDC61Q9Y6R9 SNORA77B-201ENST00000578179 125 ntBASIC2.88□□□□□ -1.95
CCDC61Q9Y6R9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 RNU6V-201ENST00000384105 107 ntBASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 SNORD42B-201ENST00000458893 67 ntBASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 RNU7-102P-201ENST00000458948 62 ntBASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 RNU7-193P-201ENST00000516723 65 ntBASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 AC036111.3-201ENST00000526389 112 ntBASIC2.87□□□□□ -1.95
CCDC61Q9Y6R9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC61Q9Y6R9 Y_RNA.250-201ENST00000364542 110 ntBASIC2.86□□□□□ -1.95
CCDC61Q9Y6R9 MIR519E-201ENST00000385075 84 ntBASIC2.86□□□□□ -1.95
CCDC61Q9Y6R9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC61Q9Y6R9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CCDC61Q9Y6R9 SNORA3A-201ENST00000364113 130 ntBASIC2.85□□□□□ -1.95
CCDC61Q9Y6R9 SNORD111-201ENST00000408139 94 ntBASIC2.85□□□□□ -1.95
CCDC61Q9Y6R9 AC018659.1-201ENST00000551083 169 ntBASIC2.85□□□□□ -1.95
CCDC61Q9Y6R9 MIR6845-201ENST00000613182 61 ntBASIC2.85□□□□□ -1.95
CCDC61Q9Y6R9 AC245884.12-201ENST00000615364 59 ntBASIC2.85□□□□□ -1.95
CCDC61Q9Y6R9 Y_RNA.174-201ENST00000363781 105 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 AL157398.1-201ENST00000452981 186 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 RNU7-104P-201ENST00000459398 79 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 MIR8074-201ENST00000615081 81 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 MIR8063-201ENST00000621930 81 ntBASIC2.84□□□□□ -1.95
CCDC61Q9Y6R9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC61Q9Y6R9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC61Q9Y6R9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC61Q9Y6R9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 RNU7-74P-201ENST00000459104 62 ntBASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 RNU7-119P-201ENST00000459279 63 ntBASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 RNU7-40P-201ENST00000516397 64 ntBASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 RNU7-161P-201ENST00000517289 62 ntBASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CCDC61Q9Y6R9 RNU6-990P-201ENST00000364385 104 ntBASIC2.82□□□□□ -1.96
CCDC61Q9Y6R9 MIR517B-201ENST00000385102 67 ntBASIC2.82□□□□□ -1.96
CCDC61Q9Y6R9 RNA5SP182-201ENST00000516064 82 ntBASIC2.82□□□□□ -1.96
CCDC61Q9Y6R9 MIR5002-201ENST00000584713 97 ntBASIC2.82□□□□□ -1.96
CCDC61Q9Y6R9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CCDC61Q9Y6R9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.82□□□□□ -1.96
CCDC61Q9Y6R9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 RNU6-698P-201ENST00000363523 107 ntBASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 RNU6-34P-201ENST00000364874 107 ntBASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 SNORA31.14-201ENST00000516728 116 ntBASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 AC067863.3-201ENST00000624172 122 ntBASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC61Q9Y6R9 MIR521-2-201ENST00000384818 87 ntBASIC2.8□□□□□ -1.96
CCDC61Q9Y6R9 RNU1-119P-201ENST00000391122 165 ntBASIC2.8□□□□□ -1.96
CCDC61Q9Y6R9 SNORA40.17-201ENST00000517256 115 ntBASIC2.8□□□□□ -1.96
CCDC61Q9Y6R9 AC106800.4-201ENST00000614905 153 ntBASIC2.8□□□□□ -1.96
CCDC61Q9Y6R9 RNA5SP276-201ENST00000362580 94 ntBASIC2.79□□□□□ -1.96
CCDC61Q9Y6R9 Y_RNA.32-201ENST00000362589 110 ntBASIC2.79□□□□□ -1.96
CCDC61Q9Y6R9 SNORA67.1-201ENST00000364749 141 ntBASIC2.79□□□□□ -1.96
CCDC61Q9Y6R9 RNA5SP181-201ENST00000410246 98 ntBASIC2.79□□□□□ -1.96
CCDC61Q9Y6R9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.79□□□□□ -1.96
CCDC61Q9Y6R9 AC010297.1-201ENST00000623948 149 ntBASIC2.79□□□□□ -1.96
CCDC61Q9Y6R9 RNA5SP458-201ENST00000516188 119 ntBASIC2.78□□□□□ -1.96
CCDC61Q9Y6R9 uc_338.16-201ENST00000621804 95 ntBASIC2.78□□□□□ -1.96
CCDC61Q9Y6R9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC61Q9Y6R9 SNORD114-4-201ENST00000363962 75 ntBASIC2.77□□□□□ -1.97
CCDC61Q9Y6R9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.77□□□□□ -1.97
CCDC61Q9Y6R9 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
CCDC61Q9Y6R9 AL359821.1-201ENST00000605519 182 ntBASIC2.77□□□□□ -1.97
CCDC61Q9Y6R9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC61Q9Y6R9 MIR583-201ENST00000384846 75 ntBASIC2.76□□□□□ -1.97
CCDC61Q9Y6R9 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
CCDC61Q9Y6R9 AC021146.9-201ENST00000512503 156 ntBASIC2.76□□□□□ -1.97
CCDC61Q9Y6R9 MIR4804-201ENST00000581683 73 ntBASIC2.76□□□□□ -1.97
CCDC61Q9Y6R9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC61Q9Y6R9 SNORD33-201ENST00000362761 85 ntBASIC2.75□□□□□ -1.97
CCDC61Q9Y6R9 RNU1-17P-201ENST00000363022 152 ntBASIC2.75□□□□□ -1.97
CCDC61Q9Y6R9 SNORD23.1-201ENST00000408212 104 ntBASIC2.75□□□□□ -1.97
CCDC61Q9Y6R9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC61Q9Y6R9 RNU6-994P-201ENST00000410507 111 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 455.8 ms