Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF209P-201ENST00000593450 2304 ntBASIC1.91□□□□□ -2.1
PCDHB11Q9Y5F2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHB11Q9Y5F2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHB11Q9Y5F2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.9□□□□□ -2.11
PCDHB11Q9Y5F2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.9□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-340P-201ENST00000364005 107 ntBASIC1.9□□□□□ -2.11
PCDHB11Q9Y5F2 RNU7-56P-201ENST00000458744 62 ntBASIC1.9□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-539P-201ENST00000516665 103 ntBASIC1.9□□□□□ -2.11
PCDHB11Q9Y5F2 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
PCDHB11Q9Y5F2 MIR100-201ENST00000385259 80 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 RNU1-119P-201ENST00000391122 165 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 MIR942-201ENST00000401111 86 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 AL359821.1-201ENST00000605519 182 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 MIR664A-201ENST00000626086 82 ntBASIC1.89□□□□□ -2.11
PCDHB11Q9Y5F2 MIR451A-201ENST00000385059 72 ntBASIC1.88□□□□□ -2.11
PCDHB11Q9Y5F2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-587P-201ENST00000391282 106 ntBASIC1.88□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-634P-201ENST00000459134 106 ntBASIC1.88□□□□□ -2.11
PCDHB11Q9Y5F2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
PCDHB11Q9Y5F2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 MIR1-1-201ENST00000362147 71 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 Y_RNA.371-201ENST00000365591 113 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 SNORA24B-201ENST00000384176 131 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 RNU2-59P-201ENST00000410482 191 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 Y_RNA.606-201ENST00000410579 103 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
PCDHB11Q9Y5F2 SNORA8.1-201ENST00000384250 140 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-154P-201ENST00000384306 106 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 SNORD12-201ENST00000391002 90 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 AC097510.1-201ENST00000510945 133 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 SNORA25.15-201ENST00000516487 89 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 SNORA70.22-201ENST00000517160 124 ntBASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
PCDHB11Q9Y5F2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-681P-201ENST00000364012 104 ntBASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 SNORD115-44-201ENST00000365391 82 ntBASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 MIR1827-201ENST00000408549 66 ntBASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 AL157834.3-201ENST00000615543 103 ntBASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 uc_338.16-201ENST00000621804 95 ntBASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.85□□□□□ -2.11
PCDHB11Q9Y5F2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-330P-201ENST00000363015 107 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 MIR520F-201ENST00000384824 87 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 AC067940.1-201ENST00000458411 300 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 RNU6-1057P-201ENST00000517162 102 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 MIR4781-201ENST00000585250 76 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.84□□□□□ -2.11
PCDHB11Q9Y5F2 MIR337-201ENST00000362281 93 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6-287P-201ENST00000516230 98 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 SNORA31.14-201ENST00000516728 116 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 U6.81-201ENST00000612550 106 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
PCDHB11Q9Y5F2 MIR378A-201ENST00000362177 66 ntBASIC1.82□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6-1241P-201ENST00000384536 107 ntBASIC1.82□□□□□ -2.12
PCDHB11Q9Y5F2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.82□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6-1052P-201ENST00000411398 104 ntBASIC1.82□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6-719P-201ENST00000516671 104 ntBASIC1.82□□□□□ -2.12
PCDHB11Q9Y5F2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PCDHB11Q9Y5F2 U3.27-201ENST00000391237 200 ntBASIC1.81□□□□□ -2.12
PCDHB11Q9Y5F2 RNU7-13P-201ENST00000516413 62 ntBASIC1.81□□□□□ -2.12
PCDHB11Q9Y5F2 RMST_2.1-201ENST00000617263 136 ntBASIC1.81□□□□□ -2.12
PCDHB11Q9Y5F2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHB11Q9Y5F2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 RNA5SP403-201ENST00000363598 108 ntBASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6-824P-201ENST00000363724 104 ntBASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 MIR154-201ENST00000385243 84 ntBASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.8□□□□□ -2.12
PCDHB11Q9Y5F2 SNORD115-24-201ENST00000363528 82 ntBASIC1.79□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.79□□□□□ -2.12
PCDHB11Q9Y5F2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHB11Q9Y5F2 RNU6-1177P-201ENST00000391058 104 ntBASIC1.78□□□□□ -2.12
PCDHB11Q9Y5F2 AC002429.1-201ENST00000437672 148 ntBASIC1.78□□□□□ -2.12
PCDHB11Q9Y5F2 MIR2113-201ENST00000459007 91 ntBASIC1.78□□□□□ -2.12
PCDHB11Q9Y5F2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PCDHB11Q9Y5F2 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
PCDHB11Q9Y5F2 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
PCDHB11Q9Y5F2 MIR3675-201ENST00000583661 73 ntBASIC1.77□□□□□ -2.13
PCDHB11Q9Y5F2 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
PCDHB11Q9Y5F2 RNU6-649P-201ENST00000384463 107 ntBASIC1.76□□□□□ -2.13
PCDHB11Q9Y5F2 RNU6-540P-201ENST00000384622 101 ntBASIC1.76□□□□□ -2.13
PCDHB11Q9Y5F2 MIR222-201ENST00000384992 110 ntBASIC1.76□□□□□ -2.13
PCDHB11Q9Y5F2 RNU7-161P-201ENST00000517289 62 ntBASIC1.76□□□□□ -2.13
PCDHB11Q9Y5F2 MIR4285-201ENST00000581001 85 ntBASIC1.76□□□□□ -2.13
PCDHB11Q9Y5F2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
PCDHB11Q9Y5F2 RNU6-1126P-201ENST00000384002 107 ntBASIC1.75□□□□□ -2.13
PCDHB11Q9Y5F2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PCDHB11Q9Y5F2 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms