Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 MIR337-201ENST00000362281 93 ntBASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 SNORD101-201ENST00000384027 73 ntBASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 Y_RNA.596-201ENST00000410462 109 ntBASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 AL606490.4-201ENST00000423117 127 ntBASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 U7.7-201ENST00000459276 60 ntBASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 uc_338.16-201ENST00000621804 95 ntBASIC1.54□□□□□ -2.16
FOXD3Q9UJU5 RNU6-664P-201ENST00000362381 107 ntBASIC1.53□□□□□ -2.16
FOXD3Q9UJU5 SNORA25.9-201ENST00000365087 128 ntBASIC1.53□□□□□ -2.16
FOXD3Q9UJU5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.53□□□□□ -2.16
FOXD3Q9UJU5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
FOXD3Q9UJU5 SNORA63.2-201ENST00000362603 126 ntBASIC1.52□□□□□ -2.17
FOXD3Q9UJU5 U6.100-201ENST00000636230 99 ntBASIC1.52□□□□□ -2.17
FOXD3Q9UJU5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 MIR520H-201ENST00000385126 88 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 RNU6-380P-201ENST00000410207 107 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 SNORA31.14-201ENST00000516728 116 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 RNU6-135P-201ENST00000516769 101 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 MIR4696-201ENST00000581431 70 ntBASIC1.51□□□□□ -2.17
FOXD3Q9UJU5 SNORD115-44-201ENST00000365391 82 ntBASIC1.5□□□□□ -2.17
FOXD3Q9UJU5 RNU6-321P-201ENST00000410912 106 ntBASIC1.5□□□□□ -2.17
FOXD3Q9UJU5 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
FOXD3Q9UJU5 RNU6-478P-201ENST00000363904 110 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 Y_RNA.264-201ENST00000364665 102 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 RNU6-686P-201ENST00000364839 107 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 RNY4P3-201ENST00000365254 95 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 SNORD105-201ENST00000386910 85 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 SNORD89-201ENST00000390981 114 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 SNORA17.3-201ENST00000391159 129 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 AL450471.1-201ENST00000447509 127 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 MIR4662A-201ENST00000637499 67 ntBASIC1.49□□□□□ -2.17
FOXD3Q9UJU5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
FOXD3Q9UJU5 RNU6-1094P-201ENST00000362416 104 ntBASIC1.48□□□□□ -2.17
FOXD3Q9UJU5 Y_RNA.221-201ENST00000364248 96 ntBASIC1.48□□□□□ -2.17
FOXD3Q9UJU5 RNU6-935P-201ENST00000410371 100 ntBASIC1.48□□□□□ -2.17
FOXD3Q9UJU5 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
FOXD3Q9UJU5 MIR8081-201ENST00000611533 95 ntBASIC1.48□□□□□ -2.17
FOXD3Q9UJU5 RNU1-124P-201ENST00000363861 145 ntBASIC1.47□□□□□ -2.17
FOXD3Q9UJU5 RNA5SP363-201ENST00000365072 115 ntBASIC1.47□□□□□ -2.17
FOXD3Q9UJU5 RNA5SP117-201ENST00000365294 118 ntBASIC1.47□□□□□ -2.17
FOXD3Q9UJU5 SNORD77.2-201ENST00000391045 68 ntBASIC1.47□□□□□ -2.17
FOXD3Q9UJU5 AP1B1P2-201ENST00000416196 106 ntBASIC1.47□□□□□ -2.17
FOXD3Q9UJU5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
FOXD3Q9UJU5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 MIRLET7A1-201ENST00000362295 80 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 RNU5F-1-201ENST00000362507 117 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 RNU6-1296P-201ENST00000383879 107 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 MIR942-201ENST00000401111 86 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 AC025627.3-201ENST00000582078 182 ntBASIC1.46□□□□□ -2.18
FOXD3Q9UJU5 SNORD115-24-201ENST00000363528 82 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 RNA5SP403-201ENST00000363598 108 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 SNORA25.8-201ENST00000364831 128 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 RNU6-1051P-201ENST00000365471 102 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 MIR499A-201ENST00000384903 122 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 RNU4-62P-201ENST00000410125 130 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 MIR8070-201ENST00000616510 88 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.45□□□□□ -2.18
FOXD3Q9UJU5 RNU6-161P-201ENST00000363051 106 ntBASIC1.44□□□□□ -2.18
FOXD3Q9UJU5 SNORD114-24-201ENST00000365029 72 ntBASIC1.44□□□□□ -2.18
FOXD3Q9UJU5 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
FOXD3Q9UJU5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXD3Q9UJU5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 RNU6-208P-201ENST00000362431 107 ntBASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 SNORD124-201ENST00000459577 104 ntBASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 TRMT112P2-201ENST00000512910 132 ntBASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 RNU6-469P-201ENST00000516253 101 ntBASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 RNU7-13P-201ENST00000516413 62 ntBASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 RNA5SP404-201ENST00000517118 132 ntBASIC1.43□□□□□ -2.18
FOXD3Q9UJU5 Y_RNA.207-201ENST00000364142 106 ntBASIC1.42□□□□□ -2.18
FOXD3Q9UJU5 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
FOXD3Q9UJU5 RNU6-1108P-201ENST00000516308 104 ntBASIC1.42□□□□□ -2.18
FOXD3Q9UJU5 RNU6-1057P-201ENST00000517162 102 ntBASIC1.42□□□□□ -2.18
FOXD3Q9UJU5 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
FOXD3Q9UJU5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.41□□□□□ -2.18
FOXD3Q9UJU5 MIR4639-201ENST00000584938 69 ntBASIC1.41□□□□□ -2.18
FOXD3Q9UJU5 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
FOXD3Q9UJU5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.41□□□□□ -2.18
FOXD3Q9UJU5 RNU6-776P-201ENST00000364403 104 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 RNU6-1022P-201ENST00000365049 104 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 MIR573-201ENST00000384964 99 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 U3.27-201ENST00000391237 200 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 RNU7-161P-201ENST00000517289 62 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 AC145423.2-201ENST00000610631 239 ntBASIC1.4□□□□□ -2.19
FOXD3Q9UJU5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 MIR451A-201ENST00000385059 72 ntBASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 RNU6-287P-201ENST00000516230 98 ntBASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 RNA5SP255-201ENST00000516370 107 ntBASIC1.39□□□□□ -2.19
FOXD3Q9UJU5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 278.2 ms