Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-49P-201ENST00000384256 107 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 MIR216A-201ENST00000385063 110 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 MIR520H-201ENST00000385126 88 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 RNU6-887P-201ENST00000410660 100 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.705-201ENST00000516862 110 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 AC025521.1-201ENST00000621624 286 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 MIR2052-201ENST00000636055 55 ntBASIC0.74□□□□□ -2.29
DDX43Q9NXZ2 SNORD36A-201ENST00000362874 73 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 SNORD58A-201ENST00000383875 65 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 MIR516A2-201ENST00000384888 90 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 MIR516A1-201ENST00000385033 90 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 RNU6-972P-201ENST00000391208 107 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 SNORD63B-201ENST00000411005 70 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 AC092628.1-201ENST00000436250 252 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 RNA5SP170-201ENST00000517150 101 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 AL513043.2-201ENST00000573941 143 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 MIR5582-201ENST00000579697 68 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 Y_RNA.57-201ENST00000362806 113 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 RNY1P7-201ENST00000384743 110 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 AC002350.1-201ENST00000490759 375 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 RNU6-162P-201ENST00000516228 103 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 MIR548H5-201ENST00000580314 60 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
DDX43Q9NXZ2 MIR101-2-201ENST00000362195 79 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 RNA5SP325-201ENST00000363756 130 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.190-201ENST00000363964 101 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 RNU6-1131P-201ENST00000364955 107 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 MIR573-201ENST00000384964 99 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 AC244505.6-201ENST00000452829 130 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 SNORA31.14-201ENST00000516728 116 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.71□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.43-201ENST00000362670 111 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.96-201ENST00000363092 109 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 RNU6-1125P-201ENST00000363601 107 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.369-201ENST00000365568 117 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 RNU6-480P-201ENST00000384332 107 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 RNY1P4-201ENST00000384595 115 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 MIR635-201ENST00000384830 98 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 RNU7-195P-201ENST00000458793 62 ntBASIC0.7□□□□□ -2.3
DDX43Q9NXZ2 RNU6-1260P-201ENST00000362944 107 ntBASIC0.69□□□□□ -2.3
DDX43Q9NXZ2 RNY4P30-201ENST00000410216 95 ntBASIC0.69□□□□□ -2.3
DDX43Q9NXZ2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.69□□□□□ -2.3
DDX43Q9NXZ2 RNU6-844P-201ENST00000517175 102 ntBASIC0.69□□□□□ -2.3
DDX43Q9NXZ2 RNU7-10P-201ENST00000607194 63 ntBASIC0.69□□□□□ -2.3
DDX43Q9NXZ2 RNU6-1255P-201ENST00000363434 112 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 SNORD116-10-201ENST00000363791 102 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 RNU6-1254P-201ENST00000391266 104 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 MIR936-201ENST00000401264 98 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 AC097635.1-201ENST00000450678 155 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 RNU7-85P-201ENST00000458851 63 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 AC138869.1-201ENST00000568623 124 ntBASIC0.68□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
DDX43Q9NXZ2 snoU13.11-201ENST00000459219 104 ntBASIC0.67□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.67□□□□□ -2.3
DDX43Q9NXZ2 RNU6-75P-201ENST00000515944 104 ntBASIC0.67□□□□□ -2.3
DDX43Q9NXZ2 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
DDX43Q9NXZ2 MIR599-201ENST00000385069 95 ntBASIC0.66□□□□□ -2.3
DDX43Q9NXZ2 MIR644A-201ENST00000385262 94 ntBASIC0.66□□□□□ -2.3
DDX43Q9NXZ2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.66□□□□□ -2.3
DDX43Q9NXZ2 RNU6-1265P-201ENST00000516342 103 ntBASIC0.66□□□□□ -2.3
DDX43Q9NXZ2 RNA5SP403-201ENST00000363598 108 ntBASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.220-201ENST00000364244 109 ntBASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 RNU6-497P-201ENST00000365316 104 ntBASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 RNU6-243P-201ENST00000391140 107 ntBASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 AC026421.1-201ENST00000519101 163 ntBASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
DDX43Q9NXZ2 MIR18A-201ENST00000362310 71 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 RNU6-957P-201ENST00000363652 99 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 RNU6-219P-201ENST00000364728 107 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 AL161932.1-201ENST00000437408 146 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 SNORD4B-201ENST00000459083 72 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 RNU7-161P-201ENST00000517289 62 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
DDX43Q9NXZ2 RNU6-294P-201ENST00000364999 102 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 RNU6-524P-201ENST00000384270 107 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 MIR193B-201ENST00000384907 83 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 RNA5SP222-201ENST00000411039 105 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 MIR1273G-201ENST00000577677 100 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 MTRNR2L2-201ENST00000604882 87 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 AC010487.4-201ENST00000637027 61 ntBASIC0.63□□□□□ -2.31
DDX43Q9NXZ2 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 RNA5SP117-201ENST00000365294 118 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 RNU6-675P-201ENST00000384236 104 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 SNORD28-201ENST00000384706 75 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.593-201ENST00000410292 98 ntBASIC0.62□□□□□ -2.31
DDX43Q9NXZ2 Y_RNA.609-201ENST00000410669 89 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms