Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 Y_RNA.68-201ENST00000362881 102 ntBASIC0.06□□□□□ -2.4
Q9N2K0 RNU6-816P-201ENST00000390914 107 ntBASIC0.06□□□□□ -2.4
Q9N2K0 RNU6-1268P-201ENST00000391214 107 ntBASIC0.06□□□□□ -2.4
Q9N2K0 RNU6-1239P-201ENST00000391310 107 ntBASIC0.06□□□□□ -2.4
Q9N2K0 MIR892B-201ENST00000401279 77 ntBASIC0.06□□□□□ -2.4
Q9N2K0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.06□□□□□ -2.4
Q9N2K0 RNU7-106P-201ENST00000459514 67 ntBASIC0.06□□□□□ -2.4
Q9N2K0 Y_RNA.681-201ENST00000516445 113 ntBASIC0.06□□□□□ -2.4
Q9N2K0 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
Q9N2K0 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
Q9N2K0 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
Q9N2K0 Y_RNA.309-201ENST00000365046 111 ntBASIC0.05□□□□□ -2.4
Q9N2K0 RNU6-652P-201ENST00000365488 107 ntBASIC0.05□□□□□ -2.4
Q9N2K0 MIR516A2-201ENST00000384888 90 ntBASIC0.05□□□□□ -2.4
Q9N2K0 MIR516A1-201ENST00000385033 90 ntBASIC0.05□□□□□ -2.4
Q9N2K0 RNU6-127P-201ENST00000390897 107 ntBASIC0.05□□□□□ -2.4
Q9N2K0 RNU6-243P-201ENST00000391140 107 ntBASIC0.05□□□□□ -2.4
Q9N2K0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.05□□□□□ -2.4
Q9N2K0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.05□□□□□ -2.4
Q9N2K0 Y_RNA.712-201ENST00000517011 92 ntBASIC0.05□□□□□ -2.4
Q9N2K0 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
Q9N2K0 MIR3920-201ENST00000581751 86 ntBASIC0.05□□□□□ -2.4
Q9N2K0 AC096720.1-201ENST00000604441 183 ntBASIC0.05□□□□□ -2.4
Q9N2K0 AL442128.1-201ENST00000615151 90 ntBASIC0.05□□□□□ -2.4
Q9N2K0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.04□□□□□ -2.4
Q9N2K0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.04□□□□□ -2.4
Q9N2K0 Y_RNA.377-201ENST00000365644 108 ntBASIC0.04□□□□□ -2.4
Q9N2K0 RNU6-1201P-201ENST00000384227 107 ntBASIC0.04□□□□□ -2.4
Q9N2K0 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
Q9N2K0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.04□□□□□ -2.4
Q9N2K0 RNU6-782P-201ENST00000516852 104 ntBASIC0.04□□□□□ -2.4
Q9N2K0 RNU6-971P-201ENST00000516920 106 ntBASIC0.04□□□□□ -2.4
Q9N2K0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.04□□□□□ -2.4
Q9N2K0 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
Q9N2K0 SNORA70.25-201ENST00000612741 95 ntBASIC0.04□□□□□ -2.4
Q9N2K0 U6.95-201ENST00000636931 70 ntBASIC0.04□□□□□ -2.4
Q9N2K0 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
Q9N2K0 MIR106A-201ENST00000384870 81 ntBASIC0.03□□□□□ -2.4
Q9N2K0 AL353813.1-201ENST00000440700 253 ntBASIC0.03□□□□□ -2.4
Q9N2K0 uc_338.28-201ENST00000612082 187 ntBASIC0.03□□□□□ -2.4
Q9N2K0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.03□□□□□ -2.4
Q9N2K0 MIR3914-2-201ENST00000637339 95 ntBASIC0.03□□□□□ -2.4
Q9N2K0 RNU6-746P-201ENST00000384112 109 ntBASIC0.02□□□□□ -2.41
Q9N2K0 Y_RNA.649-201ENST00000459077 103 ntBASIC0.02□□□□□ -2.41
Q9N2K0 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
Q9N2K0 RNU6-1062P-201ENST00000383908 107 ntBASIC0.01□□□□□ -2.41
Q9N2K0 AC006210.1-201ENST00000424882 111 ntBASIC0.01□□□□□ -2.41
Q9N2K0 AC007012.1-201ENST00000567192 175 ntBASIC0.01□□□□□ -2.41
Q9N2K0 MIR4694-201ENST00000578534 80 ntBASIC0.01□□□□□ -2.41
Q9N2K0 MIR548AD-201ENST00000584780 82 ntBASIC0.01□□□□□ -2.41
Q9N2K0 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
Q9N2K0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
Q9N2K0 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
Q9N2K0 MIR501-201ENST00000390204 84 ntBASIC0□□□□□ -2.41
Q9N2K0 SNORD110-201ENST00000408189 75 ntBASIC0□□□□□ -2.41
Q9N2K0 RNU7-107P-201ENST00000459121 61 ntBASIC0□□□□□ -2.41
Q9N2K0 RNA5SP285-201ENST00000516619 119 ntBASIC0□□□□□ -2.41
Q9N2K0 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
Q9N2K0 SNORD36A-201ENST00000362874 73 ntBASIC-0.01□□□□□ -2.41
Q9N2K0 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.01□□□□□ -2.41
Q9N2K0 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.01□□□□□ -2.41
Q9N2K0 RNU6-480P-201ENST00000384332 107 ntBASIC-0.01□□□□□ -2.41
Q9N2K0 MIR548H2-201ENST00000408874 88 ntBASIC-0.01□□□□□ -2.41
Q9N2K0 MIR3133-201ENST00000583157 78 ntBASIC-0.01□□□□□ -2.41
Q9N2K0 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 RNU6-704P-201ENST00000364162 103 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 MIR145-201ENST00000384967 88 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 MIR617-201ENST00000385030 97 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 RNU6-659P-201ENST00000516454 104 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.02□□□□□ -2.41
Q9N2K0 RNU6-929P-201ENST00000384429 107 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 MIR548A3-201ENST00000385297 97 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 RNA5SP484-201ENST00000458857 111 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 NAMPTP3-201ENST00000569273 224 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 MIR4677-201ENST00000584153 80 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 TRDV1-202ENST00000621643 102 ntBASIC-0.03□□□□□ -2.41
Q9N2K0 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 SNORD116-14-201ENST00000383894 92 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 SNORD116-17-201ENST00000383929 92 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 SNORD116-15-201ENST00000384445 92 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 SNORD116-19-201ENST00000384729 92 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 MIR329-2-201ENST00000385029 84 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 AC068339.1-201ENST00000526965 141 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 AL035470.1-201ENST00000622571 220 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 MIR6759-201ENST00000638110 65 ntBASIC-0.04□□□□□ -2.42
Q9N2K0 RNY3P2-201ENST00000362918 102 ntBASIC-0.05□□□□□ -2.42
Q9N2K0 RNU1-141P-201ENST00000364623 158 ntBASIC-0.05□□□□□ -2.42
Q9N2K0 MIR577-201ENST00000385196 96 ntBASIC-0.05□□□□□ -2.42
Q9N2K0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.05□□□□□ -2.42
Q9N2K0 RNU6-466P-201ENST00000391224 103 ntBASIC-0.05□□□□□ -2.42
Q9N2K0 AL670379.3-201ENST00000605040 251 ntBASIC-0.05□□□□□ -2.42
Q9N2K0 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms