Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SENP3Q9H4L4 SNORD115-25-201ENST00000362619 82 ntBASIC4.33□□□□□ -1.72
SENP3Q9H4L4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SENP3Q9H4L4 snoU13.15-201ENST00000459407 104 ntBASIC4.33□□□□□ -1.72
SENP3Q9H4L4 SNORA31.25-201ENST00000517242 134 ntBASIC4.33□□□□□ -1.72
SENP3Q9H4L4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SENP3Q9H4L4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SENP3Q9H4L4 RNU6-485P-201ENST00000363475 107 ntBASIC4.32□□□□□ -1.72
SENP3Q9H4L4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.32□□□□□ -1.72
SENP3Q9H4L4 SNORD109B-201ENST00000458961 67 ntBASIC4.32□□□□□ -1.72
SENP3Q9H4L4 SNORD109A-201ENST00000459128 67 ntBASIC4.32□□□□□ -1.72
SENP3Q9H4L4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.32□□□□□ -1.72
SENP3Q9H4L4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SENP3Q9H4L4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SENP3Q9H4L4 SNORD53-201ENST00000579969 78 ntBASIC4.31□□□□□ -1.72
SENP3Q9H4L4 MIR4473-201ENST00000583731 91 ntBASIC4.31□□□□□ -1.72
SENP3Q9H4L4 Y_RNA.345-201ENST00000365384 92 ntBASIC4.3□□□□□ -1.72
SENP3Q9H4L4 MIR1289-2-201ENST00000408360 111 ntBASIC4.3□□□□□ -1.72
SENP3Q9H4L4 SNORD114-30-201ENST00000364448 72 ntBASIC4.29□□□□□ -1.72
SENP3Q9H4L4 RNU1-89P-201ENST00000384592 164 ntBASIC4.29□□□□□ -1.72
SENP3Q9H4L4 AC002350.1-201ENST00000490759 375 ntBASIC4.29□□□□□ -1.72
SENP3Q9H4L4 RNA5SP24-201ENST00000516478 95 ntBASIC4.29□□□□□ -1.72
SENP3Q9H4L4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SENP3Q9H4L4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SENP3Q9H4L4 Y_RNA.363-201ENST00000365529 113 ntBASIC4.27□□□□□ -1.73
SENP3Q9H4L4 MIR548AA1-201ENST00000384971 97 ntBASIC4.27□□□□□ -1.73
SENP3Q9H4L4 AC087499.2-201ENST00000432861 149 ntBASIC4.27□□□□□ -1.73
SENP3Q9H4L4 snoU13.23-201ENST00000458863 104 ntBASIC4.27□□□□□ -1.73
SENP3Q9H4L4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.27□□□□□ -1.73
SENP3Q9H4L4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.27□□□□□ -1.73
SENP3Q9H4L4 VTRNA2-2P-201ENST00000516091 103 ntBASIC4.26□□□□□ -1.73
SENP3Q9H4L4 MIR5194-201ENST00000582634 120 ntBASIC4.26□□□□□ -1.73
SENP3Q9H4L4 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
SENP3Q9H4L4 MIR622-201ENST00000638396 96 ntBASIC4.26□□□□□ -1.73
SENP3Q9H4L4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SENP3Q9H4L4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SENP3Q9H4L4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SENP3Q9H4L4 Y_RNA.118-201ENST00000363300 101 ntBASIC4.25□□□□□ -1.73
SENP3Q9H4L4 RNU7-193P-201ENST00000516723 65 ntBASIC4.25□□□□□ -1.73
SENP3Q9H4L4 MIR8074-201ENST00000615081 81 ntBASIC4.25□□□□□ -1.73
SENP3Q9H4L4 RMST_2.1-201ENST00000617263 136 ntBASIC4.25□□□□□ -1.73
SENP3Q9H4L4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SENP3Q9H4L4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SENP3Q9H4L4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SENP3Q9H4L4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SENP3Q9H4L4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SENP3Q9H4L4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SENP3Q9H4L4 RNU6-974P-201ENST00000384099 108 ntBASIC4.22□□□□□ -1.73
SENP3Q9H4L4 SNORA3.2-201ENST00000408221 125 ntBASIC4.22□□□□□ -1.73
SENP3Q9H4L4 AL591704.2-201ENST00000421658 181 ntBASIC4.22□□□□□ -1.73
SENP3Q9H4L4 SNORA44.1-201ENST00000517031 108 ntBASIC4.22□□□□□ -1.73
SENP3Q9H4L4 RNA5SP47-201ENST00000517230 109 ntBASIC4.22□□□□□ -1.73
SENP3Q9H4L4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SENP3Q9H4L4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SENP3Q9H4L4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SENP3Q9H4L4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SENP3Q9H4L4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SENP3Q9H4L4 RNU1-112P-201ENST00000364401 164 ntBASIC4.21□□□□□ -1.74
SENP3Q9H4L4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SENP3Q9H4L4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SENP3Q9H4L4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SENP3Q9H4L4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SENP3Q9H4L4 RNA5SP212-201ENST00000391223 107 ntBASIC4.2□□□□□ -1.74
SENP3Q9H4L4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SENP3Q9H4L4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SENP3Q9H4L4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SENP3Q9H4L4 RNA5SP276-201ENST00000362580 94 ntBASIC4.19□□□□□ -1.74
SENP3Q9H4L4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SENP3Q9H4L4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SENP3Q9H4L4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SENP3Q9H4L4 SNORD18A-201ENST00000363753 72 ntBASIC4.18□□□□□ -1.74
SENP3Q9H4L4 RNU6-1267P-201ENST00000410747 107 ntBASIC4.18□□□□□ -1.74
SENP3Q9H4L4 RNA5SP470-201ENST00000516463 106 ntBASIC4.18□□□□□ -1.74
SENP3Q9H4L4 SCARNA20.6-201ENST00000517251 106 ntBASIC4.18□□□□□ -1.74
SENP3Q9H4L4 MIR4287-201ENST00000579398 78 ntBASIC4.18□□□□□ -1.74
SENP3Q9H4L4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SENP3Q9H4L4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SENP3Q9H4L4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SENP3Q9H4L4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SENP3Q9H4L4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SENP3Q9H4L4 RNU6-1065P-201ENST00000384513 106 ntBASIC4.17□□□□□ -1.74
SENP3Q9H4L4 MIR934-201ENST00000401241 83 ntBASIC4.17□□□□□ -1.74
SENP3Q9H4L4 RNU7-21P-201ENST00000459430 62 ntBASIC4.17□□□□□ -1.74
SENP3Q9H4L4 MIR2114-201ENST00000516645 80 ntBASIC4.17□□□□□ -1.74
SENP3Q9H4L4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SENP3Q9H4L4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SENP3Q9H4L4 SNORA17.3-201ENST00000391159 129 ntBASIC4.16□□□□□ -1.74
SENP3Q9H4L4 AC079140.2-201ENST00000506193 142 ntBASIC4.16□□□□□ -1.74
SENP3Q9H4L4 RNU6-1262P-201ENST00000516217 96 ntBASIC4.16□□□□□ -1.74
SENP3Q9H4L4 AC107016.2-201ENST00000547968 190 ntBASIC4.16□□□□□ -1.74
SENP3Q9H4L4 MIR3937-201ENST00000580135 106 ntBASIC4.16□□□□□ -1.74
SENP3Q9H4L4 7SK.11-201ENST00000615477 250 ntBASIC4.16□□□□□ -1.74
SENP3Q9H4L4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SENP3Q9H4L4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SENP3Q9H4L4 Y_RNA.338-201ENST00000365320 114 ntBASIC4.15□□□□□ -1.75
SENP3Q9H4L4 RNU6-482P-201ENST00000391068 107 ntBASIC4.15□□□□□ -1.75
SENP3Q9H4L4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SENP3Q9H4L4 SNORA3A-201ENST00000364113 130 ntBASIC4.14□□□□□ -1.75
SENP3Q9H4L4 Y_RNA.226-201ENST00000364337 114 ntBASIC4.14□□□□□ -1.75
SENP3Q9H4L4 MIR184-201ENST00000384962 84 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms