Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RNU6-955P-201ENST00000410497 104 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 RNU4-53P-201ENST00000410828 140 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 AL356320.1-201ENST00000429616 163 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 SCARNA18B-201ENST00000458806 135 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 RNA5SP404-201ENST00000517118 132 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 RNA5SP47-201ENST00000517230 109 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 MIR4444-1-201ENST00000581696 74 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 MIR4444-2-201ENST00000584390 74 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 AL157834.3-201ENST00000615543 103 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 MIR6810-201ENST00000622701 70 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 AC067863.3-201ENST00000624172 122 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 MIR6828-201ENST00000636181 60 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 ZNF209P-201ENST00000593450 2304 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 SNORA7.1-201ENST00000363750 139 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 RNU1-42P-201ENST00000364033 160 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 SNORD75.2-201ENST00000408784 58 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 AC093423.1-201ENST00000440817 142 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 snoU13.17-201ENST00000458802 104 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 RNU1-123P-201ENST00000458950 160 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 RNU6-634P-201ENST00000459134 106 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 RNU6-539P-201ENST00000516665 103 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 MIR548AG2-201ENST00000581228 64 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 MIR548O2-201ENST00000616090 70 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.45□□□□□ -2.34
LCE3DQ9BYE3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNA5SP289-201ENST00000362332 137 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 SNORA25.8-201ENST00000364831 128 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNU6-590P-201ENST00000365039 107 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 SNORA70.4-201ENST00000365509 134 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNU6-154P-201ENST00000384306 106 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 SNORA64-201ENST00000384674 134 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 MIR519E-201ENST00000385075 84 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNU6-587P-201ENST00000391282 106 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 UBE2Q2P12-201ENST00000414573 204 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 Z98742.3-201ENST00000418637 326 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNU7-104P-201ENST00000459398 79 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNU6-274P-201ENST00000459566 107 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 SNORD124-201ENST00000459577 104 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 AC004223.1-201ENST00000479840 271 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 AC139453.2-201ENST00000487255 133 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RPL23AP94-201ENST00000512518 302 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 RNU1-92P-201ENST00000517017 135 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 MIR3134-201ENST00000579433 74 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 MIR1254-2-201ENST00000579553 63 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 MIR3140-201ENST00000583685 90 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 Y_RNA.788-201ENST00000622394 112 ntBASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
LCE3DQ9BYE3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 RNU6-495P-201ENST00000362995 107 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 RNU6-824P-201ENST00000363724 104 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 SNORA80A-201ENST00000363922 136 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 RNU6-726P-201ENST00000364680 107 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 SNORA8.1-201ENST00000384250 140 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 Y_RNA.565-201ENST00000384719 101 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 MIR128-1-201ENST00000384921 82 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 MT-TY-201ENST00000387409 66 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 AC114801.3-201ENST00000510231 177 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 RNA5SP182-201ENST00000516064 82 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 RNU6-687P-201ENST00000516443 89 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 SNORA70.24-201ENST00000517233 118 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 MIR1273D-201ENST00000577266 86 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 MIR3612-201ENST00000579753 87 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 MIR4429-201ENST00000580105 73 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 MIR8053-201ENST00000613344 75 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 AL162376.1-201ENST00000624117 175 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 AC006386.2-201ENST00000624491 75 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 AC012005.1-201ENST00000624575 75 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 AC073869.9-201ENST00000641610 120 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 ZNF355P-201ENST00000427301 3216 ntBASIC0.43□□□□□ -2.34
LCE3DQ9BYE3 SNORA48.2-201ENST00000390926 124 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 RNU6-788P-201ENST00000390967 104 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 MIR1304-201ENST00000408243 91 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 AC244098.3-201ENST00000424803 96 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 RNU6-70P-201ENST00000516438 60 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 MIR4661-201ENST00000582720 75 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 MIR3675-201ENST00000583661 73 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 MIR502-201ENST00000606349 86 ntBASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
LCE3DQ9BYE3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 SNORD46.1-201ENST00000364139 104 ntBASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 MIR7-2-201ENST00000384970 110 ntBASIC0.41□□□□□ -2.34
LCE3DQ9BYE3 MIR644A-201ENST00000385262 94 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms