Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-321P-201ENST00000410912 106 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 AC073261.1-201ENST00000429409 121 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-1108P-201ENST00000516308 104 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 SNORD101-201ENST00000384027 73 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-291P-201ENST00000384720 107 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 MIR222-201ENST00000384992 110 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 MIR337-201ENST00000362281 93 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 RNU5F-1-201ENST00000362507 117 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 RNY4P3-201ENST00000365254 95 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 AL606490.4-201ENST00000423117 127 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 AC008608.1-201ENST00000603910 127 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-664P-201ENST00000362381 107 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-208P-201ENST00000362431 107 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-369P-201ENST00000362515 102 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 MIR889-201ENST00000401280 79 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 AP1B1P2-201ENST00000416196 106 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 MIR4303-201ENST00000581299 66 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 AC002429.1-201ENST00000437672 148 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU7-56P-201ENST00000458744 62 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 TRMT112P2-201ENST00000512910 132 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-807P-201ENST00000516805 107 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 MIR8070-201ENST00000616510 88 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 U6.100-201ENST00000636230 99 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1229P-201ENST00000364295 107 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR520F-201ENST00000384824 87 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR1827-201ENST00000408549 66 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 AC244505.6-201ENST00000452829 130 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR4696-201ENST00000581431 70 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 AL136317.1-201ENST00000612653 226 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR1297-201ENST00000637311 77 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 Y_RNA.545-201ENST00000384652 105 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-935P-201ENST00000410371 100 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 RNA5SP245-201ENST00000364239 121 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 MIR200A-201ENST00000384875 90 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 SNORD115-44-201ENST00000365391 82 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1057P-201ENST00000517162 102 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 MIR520H-201ENST00000385126 88 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-303P-201ENST00000517091 106 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RMST_2.1-201ENST00000617263 136 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.565-201ENST00000384719 101 ntBASIC1.51□□□□□ -2.17
TRIM56Q9BRZ2 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.12-201ENST00000362393 112 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 SNORD90-201ENST00000391145 111 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 SNORA31.14-201ENST00000516728 116 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 YWHAEP2-201ENST00000580066 112 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 YWHAEP3-201ENST00000582767 121 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 uc_338.16-201ENST00000621804 95 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 MIR451A-201ENST00000385059 72 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 U7.7-201ENST00000459276 60 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 RNU7-13P-201ENST00000516413 62 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 SCARNA18B-201ENST00000458806 135 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-135P-201ENST00000516769 101 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 SNORD115-24-201ENST00000363528 82 ntBASIC1.47□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-411P-201ENST00000384451 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms