Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-321P-201ENST00000410912 106 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 AC073261.1-201ENST00000429409 121 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-1108P-201ENST00000516308 104 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
TRIM56Q9BRZ2 SNORD101-201ENST00000384027 73 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-291P-201ENST00000384720 107 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 MIR222-201ENST00000384992 110 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TRIM56Q9BRZ2 MIR337-201ENST00000362281 93 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 RNU5F-1-201ENST00000362507 117 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 RNY4P3-201ENST00000365254 95 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 AL606490.4-201ENST00000423117 127 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 AC008608.1-201ENST00000603910 127 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-664P-201ENST00000362381 107 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-208P-201ENST00000362431 107 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 RNU6-369P-201ENST00000362515 102 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 MIR889-201ENST00000401280 79 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 AP1B1P2-201ENST00000416196 106 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 MIR4303-201ENST00000581299 66 ntBASIC1.59□□□□□ -2.15
TRIM56Q9BRZ2 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 AC002429.1-201ENST00000437672 148 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU7-56P-201ENST00000458744 62 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 TRMT112P2-201ENST00000512910 132 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-807P-201ENST00000516805 107 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 MIR8070-201ENST00000616510 88 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 U6.100-201ENST00000636230 99 ntBASIC1.58□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1229P-201ENST00000364295 107 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR520F-201ENST00000384824 87 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR1827-201ENST00000408549 66 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 AC244505.6-201ENST00000452829 130 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR4696-201ENST00000581431 70 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 AL136317.1-201ENST00000612653 226 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 MIR1297-201ENST00000637311 77 ntBASIC1.57□□□□□ -2.16
TRIM56Q9BRZ2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 Y_RNA.545-201ENST00000384652 105 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
TRIM56Q9BRZ2 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-935P-201ENST00000410371 100 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM56Q9BRZ2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 RNA5SP245-201ENST00000364239 121 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 MIR200A-201ENST00000384875 90 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
TRIM56Q9BRZ2 SNORD115-44-201ENST00000365391 82 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 RNU6-1057P-201ENST00000517162 102 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.53□□□□□ -2.16
TRIM56Q9BRZ2 MIR520H-201ENST00000385126 88 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-303P-201ENST00000517091 106 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 RMST_2.1-201ENST00000617263 136 ntBASIC1.52□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.565-201ENST00000384719 101 ntBASIC1.51□□□□□ -2.17
TRIM56Q9BRZ2 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.12-201ENST00000362393 112 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 SNORD90-201ENST00000391145 111 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 SNORA31.14-201ENST00000516728 116 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 YWHAEP2-201ENST00000580066 112 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 YWHAEP3-201ENST00000582767 121 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 uc_338.16-201ENST00000621804 95 ntBASIC1.5□□□□□ -2.17
TRIM56Q9BRZ2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 MIR451A-201ENST00000385059 72 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 U7.7-201ENST00000459276 60 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 RNU7-13P-201ENST00000516413 62 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
TRIM56Q9BRZ2 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 SCARNA18B-201ENST00000458806 135 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-135P-201ENST00000516769 101 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.48□□□□□ -2.17
TRIM56Q9BRZ2 SNORD115-24-201ENST00000363528 82 ntBASIC1.47□□□□□ -2.17
TRIM56Q9BRZ2 RNU6-411P-201ENST00000384451 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms