Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 MIR4694-201ENST00000578534 80 ntBASIC0.47□□□□□ -2.33
CLSTN3Q9BQT9 RNU6-90P-201ENST00000606352 106 ntBASIC0.47□□□□□ -2.33
CLSTN3Q9BQT9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.47□□□□□ -2.33
CLSTN3Q9BQT9 AC090625.1-201ENST00000357130 210 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 Y_RNA.342-201ENST00000365352 113 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 SNORA19-201ENST00000384737 128 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 MIR519A1-201ENST00000385257 85 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 RNU7-195P-201ENST00000458793 62 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-412P-201ENST00000516434 106 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 RNA5SP268-201ENST00000516828 124 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 SNORA25.18-201ENST00000607153 114 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 MIR6828-201ENST00000636181 60 ntBASIC0.46□□□□□ -2.34
CLSTN3Q9BQT9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-834P-201ENST00000362367 110 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 RNY3P2-201ENST00000362918 102 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 Y_RNA.173-201ENST00000363776 113 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 Y_RNA.323-201ENST00000365157 109 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 MIR599-201ENST00000385069 95 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 AC097635.1-201ENST00000450678 155 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 RNA5SP227-201ENST00000516184 113 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 MIR6129-201ENST00000616087 109 ntBASIC0.45□□□□□ -2.34
CLSTN3Q9BQT9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-832P-201ENST00000363319 107 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-1107P-201ENST00000364817 104 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-1014P-201ENST00000383940 103 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-1056P-201ENST00000383996 107 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 MIR516A2-201ENST00000384888 90 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 MIR516A1-201ENST00000385033 90 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 AC096720.1-201ENST00000604441 183 ntBASIC0.44□□□□□ -2.34
CLSTN3Q9BQT9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.43□□□□□ -2.34
CLSTN3Q9BQT9 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
CLSTN3Q9BQT9 RNU7-161P-201ENST00000517289 62 ntBASIC0.43□□□□□ -2.34
CLSTN3Q9BQT9 MIR3613-201ENST00000579844 87 ntBASIC0.43□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 RNA5SP403-201ENST00000363598 108 ntBASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 RNA5SP63-201ENST00000391225 112 ntBASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 RNU2-59P-201ENST00000410482 191 ntBASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 AC141557.1-201ENST00000540982 400 ntBASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 MIR7107-201ENST00000611489 80 ntBASIC0.42□□□□□ -2.34
CLSTN3Q9BQT9 Y_RNA.57-201ENST00000362806 113 ntBASIC0.41□□□□□ -2.34
CLSTN3Q9BQT9 RNU6-1163P-201ENST00000364516 107 ntBASIC0.41□□□□□ -2.34
CLSTN3Q9BQT9 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
CLSTN3Q9BQT9 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
CLSTN3Q9BQT9 MIR2909-201ENST00000617113 69 ntBASIC0.41□□□□□ -2.34
CLSTN3Q9BQT9 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-524P-201ENST00000384270 107 ntBASIC0.4□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.4□□□□□ -2.35
CLSTN3Q9BQT9 RNU7-104P-201ENST00000459398 79 ntBASIC0.4□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.659-201ENST00000515994 113 ntBASIC0.4□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-589P-201ENST00000516485 107 ntBASIC0.4□□□□□ -2.35
CLSTN3Q9BQT9 SNORD44.1-201ENST00000363202 61 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-726P-201ENST00000364680 107 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.273-201ENST00000364703 102 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1081P-201ENST00000384537 107 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 MIR548L-201ENST00000408303 86 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 AC109327.2-201ENST00000448339 378 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-848P-201ENST00000515948 107 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-617P-201ENST00000516147 107 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-473P-201ENST00000516164 107 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 AC067863.3-201ENST00000624172 122 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 U2.22-201ENST00000636441 106 ntBASIC0.39□□□□□ -2.35
CLSTN3Q9BQT9 SNORD36A-201ENST00000362874 73 ntBASIC0.38□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.163-201ENST00000363702 113 ntBASIC0.38□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-243P-201ENST00000391140 107 ntBASIC0.38□□□□□ -2.35
CLSTN3Q9BQT9 AC069271.1-201ENST00000445577 156 ntBASIC0.38□□□□□ -2.35
CLSTN3Q9BQT9 RNU4-36P-201ENST00000364294 144 ntBASIC0.37□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-35P-201ENST00000384530 107 ntBASIC0.37□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-86P-201ENST00000606534 107 ntBASIC0.37□□□□□ -2.35
CLSTN3Q9BQT9 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.10-201ENST00000362371 110 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1244P-201ENST00000363614 108 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 SNORD45B-201ENST00000364617 72 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 MIR181B2-201ENST00000385004 89 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.601-201ENST00000410500 113 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 SNORA19.1-201ENST00000410656 129 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.629-201ENST00000411368 105 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 RNA5SP285-201ENST00000516619 119 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.709-201ENST00000516952 92 ntBASIC0.36□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1290P-201ENST00000362957 109 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.78-201ENST00000362970 110 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 Y_RNA.95-201ENST00000363079 95 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1125P-201ENST00000363601 107 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-480P-201ENST00000384332 107 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-106P-201ENST00000384405 107 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 SNORD41.1-201ENST00000391000 69 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 MIR1302-5-201ENST00000408164 150 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-904P-201ENST00000516206 101 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 MIR4439-201ENST00000583746 80 ntBASIC0.35□□□□□ -2.35
CLSTN3Q9BQT9 RNU6-554P-201ENST00000410466 106 ntBASIC0.34□□□□□ -2.36
CLSTN3Q9BQT9 MIR3920-201ENST00000581751 86 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms