Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 MIR518E-201ENST00000385252 88 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 RNU6-466P-201ENST00000391224 103 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 U7.4-201ENST00000614961 63 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLIP3Q96DZ5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 RNU6-1094P-201ENST00000362416 104 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.56-201ENST00000362798 112 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 Y_RNA.491-201ENST00000384417 107 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 MIR635-201ENST00000384830 98 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 MIR1257-201ENST00000408490 117 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 AC092628.1-201ENST00000436250 252 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 SCARNA18B-201ENST00000458806 135 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 FGF7P7-201ENST00000514120 227 ntBASIC1.34□□□□□ -2.19
CLIP3Q96DZ5 RNU6-369P-201ENST00000362515 102 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 RNU6-934P-201ENST00000365154 107 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 MIR125B2-201ENST00000385128 89 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 RNU6-1108P-201ENST00000516308 104 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 RNU6-765P-201ENST00000516916 99 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 MIR548H5-201ENST00000580314 60 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
CLIP3Q96DZ5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 MIR548U-201ENST00000390728 81 ntBASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 Y_RNA.660-201ENST00000516002 120 ntBASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 Y_RNA.809-201ENST00000516058 95 ntBASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 RNU6-448P-201ENST00000517052 107 ntBASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 AC023827.1-201ENST00000569247 97 ntBASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 AC106800.4-201ENST00000614905 153 ntBASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.32□□□□□ -2.2
CLIP3Q96DZ5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 MIR101-2-201ENST00000362195 79 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 MIR200A-201ENST00000384875 90 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 SNORD111-201ENST00000408139 94 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 MIR4771-2-201ENST00000577758 74 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 MIR3134-201ENST00000579433 74 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 MIR4771-1-201ENST00000582617 74 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 MTRNR2L2-201ENST00000604882 87 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 TRDV1-202ENST00000621643 102 ntBASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLIP3Q96DZ5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLIP3Q96DZ5 RNA5SP247-201ENST00000411181 105 ntBASIC1.3□□□□□ -2.2
CLIP3Q96DZ5 RPS26P5-201ENST00000418544 335 ntBASIC1.3□□□□□ -2.2
CLIP3Q96DZ5 Y_RNA.697-201ENST00000516776 113 ntBASIC1.3□□□□□ -2.2
CLIP3Q96DZ5 RNU7-10P-201ENST00000607194 63 ntBASIC1.3□□□□□ -2.2
CLIP3Q96DZ5 U6.100-201ENST00000636230 99 ntBASIC1.3□□□□□ -2.2
CLIP3Q96DZ5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 Y_RNA.545-201ENST00000384652 105 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 SNORD77.2-201ENST00000391045 68 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 AC097635.1-201ENST00000450678 155 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 snoU13.17-201ENST00000458802 104 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 RNU7-156P-201ENST00000517214 74 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 MIR4696-201ENST00000581431 70 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
CLIP3Q96DZ5 AC074348.1-201ENST00000426503 132 ntBASIC1.28□□□□□ -2.2
CLIP3Q96DZ5 RNU6-1265P-201ENST00000516342 103 ntBASIC1.28□□□□□ -2.2
CLIP3Q96DZ5 MIR4676-201ENST00000583078 72 ntBASIC1.28□□□□□ -2.2
CLIP3Q96DZ5 RNU6-208P-201ENST00000362431 107 ntBASIC1.27□□□□□ -2.21
CLIP3Q96DZ5 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
CLIP3Q96DZ5 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
CLIP3Q96DZ5 RNU6-291P-201ENST00000384720 107 ntBASIC1.27□□□□□ -2.21
CLIP3Q96DZ5 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
CLIP3Q96DZ5 SNORD124-201ENST00000459577 104 ntBASIC1.27□□□□□ -2.21
CLIP3Q96DZ5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLIP3Q96DZ5 RNU6-664P-201ENST00000362381 107 ntBASIC1.26□□□□□ -2.21
CLIP3Q96DZ5 RNU6-1051P-201ENST00000365471 102 ntBASIC1.26□□□□□ -2.21
CLIP3Q96DZ5 MIR599-201ENST00000385069 95 ntBASIC1.26□□□□□ -2.21
CLIP3Q96DZ5 MIR4804-201ENST00000581683 73 ntBASIC1.26□□□□□ -2.21
CLIP3Q96DZ5 AC008608.1-201ENST00000603910 127 ntBASIC1.26□□□□□ -2.21
CLIP3Q96DZ5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 Y_RNA.264-201ENST00000364665 102 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 SNORD101-201ENST00000384027 73 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 MIR942-201ENST00000401111 86 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 FABP5P4-201ENST00000437203 171 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 AC138907.6-201ENST00000568401 126 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 AC138869.1-201ENST00000568623 124 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 MIR4484-201ENST00000582855 83 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
CLIP3Q96DZ5 Y_RNA.239-201ENST00000364444 113 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 RNU6-788P-201ENST00000390967 104 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 AC244505.6-201ENST00000452829 130 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 RNU7-56P-201ENST00000458744 62 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 RNU7-102P-201ENST00000458948 62 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 RNU6-303P-201ENST00000517091 106 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 MIR3140-201ENST00000583685 90 ntBASIC1.24□□□□□ -2.21
CLIP3Q96DZ5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
CLIP3Q96DZ5 Y_RNA.207-201ENST00000364142 106 ntBASIC1.23□□□□□ -2.21
CLIP3Q96DZ5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.23□□□□□ -2.21
CLIP3Q96DZ5 SNORA24B-201ENST00000384176 131 ntBASIC1.23□□□□□ -2.21
CLIP3Q96DZ5 RNU6-535P-201ENST00000384722 107 ntBASIC1.23□□□□□ -2.21
CLIP3Q96DZ5 MIR938-201ENST00000401216 83 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms