Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 SNORA51.5-201ENST00000384126 131 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 AC109327.2-201ENST00000448339 378 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 SCARNA23-201ENST00000516060 130 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 RNA5SP47-201ENST00000517230 109 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 Y_RNA.818-201ENST00000618813 71 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 MIR6828-201ENST00000636181 60 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 AC091304.10-201ENST00000641554 121 ntBASIC0.71□□□□□ -2.3
RAPGEF4Q8WZA2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-1125P-201ENST00000363601 107 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-756P-201ENST00000383997 107 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-480P-201ENST00000384332 107 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 MIR516A2-201ENST00000384888 90 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 MIR590-201ENST00000385008 97 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 MIR516A1-201ENST00000385033 90 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 MIR599-201ENST00000385069 95 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 AL031737.1-201ENST00000450125 223 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 RNU7-195P-201ENST00000458793 62 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 MIR4777-201ENST00000583710 86 ntBASIC0.7□□□□□ -2.3
RAPGEF4Q8WZA2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 Y_RNA.57-201ENST00000362806 113 ntBASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-1254P-201ENST00000391266 104 ntBASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 RNA5SP330-201ENST00000517096 96 ntBASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
RAPGEF4Q8WZA2 SNORD36A-201ENST00000362874 73 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 SNORD115-24-201ENST00000363528 82 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 RNA5SP403-201ENST00000363598 108 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 RNA5SP457-201ENST00000363657 124 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-44P-201ENST00000384045 107 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 AC012531.4-201ENST00000616509 177 ntBASIC0.68□□□□□ -2.3
RAPGEF4Q8WZA2 SNORA36.1-201ENST00000363424 132 ntBASIC0.67□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.67□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-86P-201ENST00000606534 107 ntBASIC0.67□□□□□ -2.3
RAPGEF4Q8WZA2 AC244669.1-204ENST00000621564 178 ntBASIC0.67□□□□□ -2.3
RAPGEF4Q8WZA2 SNORA63.4-201ENST00000362763 126 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-813P-201ENST00000384691 107 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-795P-201ENST00000516323 103 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 RNU6-158P-201ENST00000517104 100 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 RNU7-161P-201ENST00000517289 62 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 AC018659.1-201ENST00000551083 169 ntBASIC0.66□□□□□ -2.3
RAPGEF4Q8WZA2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.93-201ENST00000363066 109 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 RNA5SP517-201ENST00000364724 117 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.544-201ENST00000384650 113 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 MIR181B2-201ENST00000385004 89 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-243P-201ENST00000391140 107 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 AC114737.2-201ENST00000421583 173 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 MIR8087-201ENST00000612745 78 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
RAPGEF4Q8WZA2 MIR330-201ENST00000362196 94 ntBASIC0.64□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.96-201ENST00000363092 109 ntBASIC0.64□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.467-201ENST00000384297 102 ntBASIC0.64□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-1265P-201ENST00000516342 103 ntBASIC0.64□□□□□ -2.31
RAPGEF4Q8WZA2 MIR548Z-201ENST00000584743 97 ntBASIC0.64□□□□□ -2.31
RAPGEF4Q8WZA2 MIR450A1-201ENST00000362262 91 ntBASIC0.63□□□□□ -2.31
RAPGEF4Q8WZA2 SNORA8.2-201ENST00000384372 139 ntBASIC0.63□□□□□ -2.31
RAPGEF4Q8WZA2 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-109P-201ENST00000516364 107 ntBASIC0.63□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-184P-201ENST00000516514 107 ntBASIC0.63□□□□□ -2.31
RAPGEF4Q8WZA2 RNA5SP268-201ENST00000516828 124 ntBASIC0.63□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.107-201ENST00000363190 121 ntBASIC0.62□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.62□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-524P-201ENST00000384270 107 ntBASIC0.62□□□□□ -2.31
RAPGEF4Q8WZA2 AC025521.1-201ENST00000621624 286 ntBASIC0.62□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-147P-201ENST00000383983 107 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-644P-201ENST00000391155 98 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-972P-201ENST00000391208 107 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 SNORA40.8-201ENST00000411034 126 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.705-201ENST00000516862 110 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 AC103810.7-201ENST00000607821 91 ntBASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RAPGEF4Q8WZA2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-726P-201ENST00000364680 107 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 SNORD41.1-201ENST00000391000 69 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 AL513043.2-201ENST00000573941 143 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.81-201ENST00000362997 102 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 RNU6-887P-201ENST00000410660 100 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
RAPGEF4Q8WZA2 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 459.3 ms