Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RNU6-881P-201ENST00000516813 102 ntBASIC1.83□□□□□ -2.12
TMEM40Q8WWA1 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
TMEM40Q8WWA1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.83□□□□□ -2.12
TMEM40Q8WWA1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TMEM40Q8WWA1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 MIR377-201ENST00000362145 69 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 RNU6-681P-201ENST00000364012 104 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 RNY4P3-201ENST00000365254 95 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 SNORD116-24-201ENST00000384549 92 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 SNORA67.5-201ENST00000391036 107 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 AP1B1P2-201ENST00000416196 106 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 snoU13.21-201ENST00000459368 105 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.82□□□□□ -2.12
TMEM40Q8WWA1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.81□□□□□ -2.12
TMEM40Q8WWA1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.81□□□□□ -2.12
TMEM40Q8WWA1 RNU6-902P-201ENST00000517212 91 ntBASIC1.81□□□□□ -2.12
TMEM40Q8WWA1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.81□□□□□ -2.12
TMEM40Q8WWA1 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
TMEM40Q8WWA1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.81□□□□□ -2.12
TMEM40Q8WWA1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 SNORA25.4-201ENST00000363666 124 ntBASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 AC048334.1-201ENST00000477975 159 ntBASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 MIR548H5-201ENST00000580314 60 ntBASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 AL109933.3-201ENST00000619095 188 ntBASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TMEM40Q8WWA1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 SNORD113.1-201ENST00000363280 73 ntBASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 SNORA24B-201ENST00000384176 131 ntBASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 AC097510.1-201ENST00000510945 133 ntBASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 SNORA31.2-201ENST00000516019 134 ntBASIC1.79□□□□□ -2.12
TMEM40Q8WWA1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 RNU6-1216P-201ENST00000362590 107 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 RNU6-580P-201ENST00000365159 107 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 MIR633-201ENST00000384821 98 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 MIR519A1-201ENST00000385257 85 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 RNU6-604P-201ENST00000390917 100 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 MIR18B-201ENST00000454574 71 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 RNU7-185P-201ENST00000459215 60 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 U6.81-201ENST00000612550 106 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.78□□□□□ -2.12
TMEM40Q8WWA1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TMEM40Q8WWA1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.77□□□□□ -2.13
TMEM40Q8WWA1 SNORD83.1-201ENST00000411362 77 ntBASIC1.77□□□□□ -2.13
TMEM40Q8WWA1 RNU7-95P-201ENST00000459222 64 ntBASIC1.77□□□□□ -2.13
TMEM40Q8WWA1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.77□□□□□ -2.13
TMEM40Q8WWA1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
TMEM40Q8WWA1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.76□□□□□ -2.13
TMEM40Q8WWA1 MIR451A-201ENST00000385059 72 ntBASIC1.76□□□□□ -2.13
TMEM40Q8WWA1 MIR4511-201ENST00000582784 87 ntBASIC1.76□□□□□ -2.13
TMEM40Q8WWA1 RNU7-10P-201ENST00000607194 63 ntBASIC1.76□□□□□ -2.13
TMEM40Q8WWA1 MIR8053-201ENST00000613344 75 ntBASIC1.76□□□□□ -2.13
TMEM40Q8WWA1 MIR4773-1-201ENST00000637203 78 ntBASIC1.76□□□□□ -2.13
TMEM40Q8WWA1 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
TMEM40Q8WWA1 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
TMEM40Q8WWA1 RNU6-321P-201ENST00000410912 106 ntBASIC1.75□□□□□ -2.13
TMEM40Q8WWA1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TMEM40Q8WWA1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 RNA5SP245-201ENST00000364239 121 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 MIR599-201ENST00000385069 95 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 RNU6-935P-201ENST00000410371 100 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 RNU6-141P-201ENST00000410499 105 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
TMEM40Q8WWA1 RNU6-382P-201ENST00000365181 106 ntBASIC1.73□□□□□ -2.13
TMEM40Q8WWA1 SNORA75.2-201ENST00000391138 150 ntBASIC1.73□□□□□ -2.13
TMEM40Q8WWA1 SNORA75.3-201ENST00000391231 150 ntBASIC1.73□□□□□ -2.13
TMEM40Q8WWA1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.73□□□□□ -2.13
TMEM40Q8WWA1 MIR1257-201ENST00000408490 117 ntBASIC1.73□□□□□ -2.13
TMEM40Q8WWA1 AC110620.1-201ENST00000416042 228 ntBASIC1.73□□□□□ -2.13
TMEM40Q8WWA1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 AC097635.1-201ENST00000450678 155 ntBASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 RNU6-982P-201ENST00000516216 102 ntBASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 AC103706.3-201ENST00000636297 85 ntBASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TMEM40Q8WWA1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.71□□□□□ -2.14
TMEM40Q8WWA1 SNORA40.6-201ENST00000391153 128 ntBASIC1.71□□□□□ -2.14
TMEM40Q8WWA1 AL591704.2-201ENST00000421658 181 ntBASIC1.71□□□□□ -2.14
TMEM40Q8WWA1 AL359821.1-201ENST00000605519 182 ntBASIC1.71□□□□□ -2.14
TMEM40Q8WWA1 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
TMEM40Q8WWA1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TMEM40Q8WWA1 SNORD113.3-201ENST00000364630 78 ntBASIC1.7□□□□□ -2.14
TMEM40Q8WWA1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.7□□□□□ -2.14
TMEM40Q8WWA1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms