Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RNU6-1333P-201ENST00000516162 93 ntBASIC0.09□□□□□ -2.4
LINC01555Q8NAE3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.09□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.712-201ENST00000517011 92 ntBASIC0.09□□□□□ -2.4
LINC01555Q8NAE3 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
LINC01555Q8NAE3 MIR330-201ENST00000362196 94 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 MIR501-201ENST00000390204 84 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 RNU6-243P-201ENST00000391140 107 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 MIR1912-201ENST00000410389 80 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 MIR3613-201ENST00000579844 87 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 MIR548AG2-201ENST00000581228 64 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
LINC01555Q8NAE3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 SNORD36A-201ENST00000362874 73 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 RNU6-957P-201ENST00000363652 99 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 RNA5SP325-201ENST00000363756 130 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 U8.6-201ENST00000364939 135 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 SNORD116-14-201ENST00000383894 92 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 SNORD116-17-201ENST00000383929 92 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 SNORD116-15-201ENST00000384445 92 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 SNORD116-19-201ENST00000384729 92 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 MIR593-201ENST00000384856 100 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 AC006210.1-201ENST00000424882 111 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 RNU6-1018P-201ENST00000516577 106 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 AC068339.1-201ENST00000526965 141 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 TRDV1-202ENST00000621643 102 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 U6.100-201ENST00000636230 99 ntBASIC0.07□□□□□ -2.4
LINC01555Q8NAE3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.309-201ENST00000365046 111 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 MIR181B2-201ENST00000385004 89 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 MIR548M-201ENST00000408260 86 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 AC109327.2-201ENST00000448339 378 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 RNU6-86P-201ENST00000606534 107 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 AL365222.1-201ENST00000614661 98 ntBASIC0.06□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.78-201ENST00000362970 110 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 SNORD50.2-201ENST00000365465 70 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 SNORA51.5-201ENST00000384126 131 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 SNORD110-201ENST00000408189 75 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 snoU13.11-201ENST00000459219 104 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 AL670379.3-201ENST00000605040 251 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 U6.95-201ENST00000636931 70 ntBASIC0.05□□□□□ -2.4
LINC01555Q8NAE3 RNU6-832P-201ENST00000363319 107 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.353-201ENST00000365440 108 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 RNU6-959P-201ENST00000384671 107 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 MIR4679-2-201ENST00000578358 77 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 MIR4473-201ENST00000583731 91 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 MIR548Z-201ENST00000584743 97 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 uc_338.28-201ENST00000612082 187 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 MIR8087-201ENST00000612745 78 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 AC025521.1-201ENST00000621624 286 ntBASIC0.04□□□□□ -2.4
LINC01555Q8NAE3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 MIR519E-201ENST00000385075 84 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 SNORA19.1-201ENST00000410656 129 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 HMGN2P22-201ENST00000427588 175 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 MIR2113-201ENST00000459007 91 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 RNU6-287P-201ENST00000516230 98 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 SNORA62.5-201ENST00000516634 120 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 RNA5SP330-201ENST00000517096 96 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 MIR4694-201ENST00000578534 80 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 MIR5009-201ENST00000578736 100 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 AC096720.1-201ENST00000604441 183 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 MIR6779-201ENST00000617283 64 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 AC073869.9-201ENST00000641610 120 ntBASIC0.03□□□□□ -2.4
LINC01555Q8NAE3 RNY3P2-201ENST00000362918 102 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 SNORD116-21-201ENST00000384507 92 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 MIR106A-201ENST00000384870 81 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 MIR548H2-201ENST00000408874 88 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 MIR4677-201ENST00000584153 80 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 MIR3925-201ENST00000584674 77 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
LINC01555Q8NAE3 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 RNU6-509P-201ENST00000363519 107 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 RNU1-141P-201ENST00000364623 158 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 Y_RNA.377-201ENST00000365644 108 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 Y_RNA.467-201ENST00000384297 102 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 MIR145-201ENST00000384967 88 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 MIR1197-201ENST00000408818 88 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 RNU6-795P-201ENST00000516323 103 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.01□□□□□ -2.41
LINC01555Q8NAE3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
LINC01555Q8NAE3 Y_RNA.563-201ENST00000384707 108 ntBASIC0□□□□□ -2.41
LINC01555Q8NAE3 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
LINC01555Q8NAE3 RNU6-466P-201ENST00000391224 103 ntBASIC0□□□□□ -2.41
LINC01555Q8NAE3 RNU5B-6P-201ENST00000516765 68 ntBASIC0□□□□□ -2.41
LINC01555Q8NAE3 MIR548AD-201ENST00000584780 82 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 233.2 ms