Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 SNORD63B-201ENST00000411005 70 ntBASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.629-201ENST00000411368 105 ntBASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 RNA5SP47-201ENST00000517230 109 ntBASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 MIR548AI-201ENST00000579940 88 ntBASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 MIR6129-201ENST00000616087 109 ntBASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.39□□□□□ -2.35
ZC3H3Q8IXZ2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.39□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-589P-201ENST00000516485 107 ntBASIC0.39□□□□□ -2.35
ZC3H3Q8IXZ2 AC141557.1-201ENST00000540982 400 ntBASIC0.39□□□□□ -2.35
ZC3H3Q8IXZ2 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.78-201ENST00000362970 110 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 SNORA36.1-201ENST00000363424 132 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.291-201ENST00000364886 113 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 AC097635.1-201ENST00000450678 155 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 RNU7-106P-201ENST00000459514 67 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 AC244669.1-204ENST00000621564 178 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 MIR6828-201ENST00000636181 60 ntBASIC0.38□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.10-201ENST00000362371 110 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1260P-201ENST00000362944 107 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1290P-201ENST00000362957 109 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 SNORD115-24-201ENST00000363528 82 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1163P-201ENST00000364516 107 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 MIR599-201ENST00000385069 95 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 SNORD71-201ENST00000411292 86 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.709-201ENST00000516952 92 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 MIR3613-201ENST00000579844 87 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 MIR4439-201ENST00000583746 80 ntBASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
ZC3H3Q8IXZ2 RNU4-36P-201ENST00000364294 144 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 MIR516A2-201ENST00000384888 90 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 MIR516A1-201ENST00000385033 90 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1254P-201ENST00000391266 104 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 MIR1302-5-201ENST00000408164 150 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.601-201ENST00000410500 113 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 AC091304.10-201ENST00000641554 121 ntBASIC0.36□□□□□ -2.35
ZC3H3Q8IXZ2 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.57-201ENST00000362806 113 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 RNA5SP403-201ENST00000363598 108 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1125P-201ENST00000363601 107 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.163-201ENST00000363702 113 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 SNORD45B-201ENST00000364617 72 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-1325P-201ENST00000364905 105 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-480P-201ENST00000384332 107 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 AC109327.2-201ENST00000448339 378 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 Y_RNA.659-201ENST00000515994 113 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 RNU7-161P-201ENST00000517289 62 ntBASIC0.35□□□□□ -2.35
ZC3H3Q8IXZ2 SNORD36A-201ENST00000362874 73 ntBASIC0.34□□□□□ -2.36
ZC3H3Q8IXZ2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.34□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-1113P-201ENST00000384348 107 ntBASIC0.34□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-106P-201ENST00000384405 107 ntBASIC0.34□□□□□ -2.36
ZC3H3Q8IXZ2 RNA5SP227-201ENST00000516184 113 ntBASIC0.34□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-904P-201ENST00000516206 101 ntBASIC0.34□□□□□ -2.36
ZC3H3Q8IXZ2 Y_RNA.95-201ENST00000363079 95 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 RNY4P18-201ENST00000391107 89 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-243P-201ENST00000391140 107 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 RNA5SP395-201ENST00000516567 118 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-86P-201ENST00000606534 107 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 AC067863.3-201ENST00000624172 122 ntBASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
ZC3H3Q8IXZ2 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-1244P-201ENST00000363614 108 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-524P-201ENST00000384270 107 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 MIR181B2-201ENST00000385004 89 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-554P-201ENST00000410466 106 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 SCARNA23-201ENST00000516060 130 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 MIR2909-201ENST00000617113 69 ntBASIC0.32□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-215P-201ENST00000365169 102 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 SNORD20-201ENST00000384550 80 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 SNORD41.1-201ENST00000391000 69 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 RNU2-59P-201ENST00000410482 191 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 MIR4777-201ENST00000583710 86 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 MIR7107-201ENST00000611489 80 ntBASIC0.31□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.3□□□□□ -2.36
ZC3H3Q8IXZ2 SNORA51.5-201ENST00000384126 131 ntBASIC0.3□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-813P-201ENST00000384691 107 ntBASIC0.3□□□□□ -2.36
ZC3H3Q8IXZ2 RNU7-104P-201ENST00000459398 79 ntBASIC0.3□□□□□ -2.36
ZC3H3Q8IXZ2 RNU6-1265P-201ENST00000516342 103 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 270 ms