Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU7-85P-201ENST00000458851 63 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 MIR1273G-201ENST00000577677 100 ntBASIC1.2□□□□□ -2.22
KRT40Q6A162 MIR494-201ENST00000349529 81 ntBASIC1.19□□□□□ -2.22
KRT40Q6A162 Y_RNA.56-201ENST00000362798 112 ntBASIC1.19□□□□□ -2.22
KRT40Q6A162 Y_RNA.115-201ENST00000363272 98 ntBASIC1.19□□□□□ -2.22
KRT40Q6A162 MIR520F-201ENST00000384824 87 ntBASIC1.19□□□□□ -2.22
KRT40Q6A162 Y_RNA.697-201ENST00000516776 113 ntBASIC1.19□□□□□ -2.22
KRT40Q6A162 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRT40Q6A162 Y_RNA.73-201ENST00000362910 113 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 SNORD116-22-201ENST00000384430 92 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 MIR450A2-201ENST00000385022 100 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 RNU7-195P-201ENST00000458793 62 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 snoU13.11-201ENST00000459219 104 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 RN7SKP12-201ENST00000516275 143 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 MIR3973-201ENST00000579824 107 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 AC211469.2-201ENST00000605461 205 ntBASIC1.18□□□□□ -2.22
KRT40Q6A162 SNORD115-27-201ENST00000364430 82 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 RNU6-1335P-201ENST00000365426 107 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 MIR519A1-201ENST00000385257 85 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 SNORA26.2-201ENST00000390922 122 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 RNU6-1254P-201ENST00000391266 104 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 Y_RNA.648-201ENST00000459455 110 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 RNA5SP476-201ENST00000516613 103 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 AP003327.1-201ENST00000529684 127 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 MIR548H5-201ENST00000580314 60 ntBASIC1.17□□□□□ -2.22
KRT40Q6A162 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRT40Q6A162 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRT40Q6A162 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 MIR635-201ENST00000384830 98 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 RNU1-119P-201ENST00000391122 165 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 RNU6-592P-201ENST00000411333 103 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 SNORD4B-201ENST00000459083 72 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 SNORA72.7-201ENST00000516349 94 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 CYP3A137P-201ENST00000562436 69 ntBASIC1.16□□□□□ -2.22
KRT40Q6A162 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
KRT40Q6A162 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
KRT40Q6A162 Y_RNA.32-201ENST00000362589 110 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 MIR520H-201ENST00000385126 88 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 RNU6-75P-201ENST00000515944 104 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 RNU6-1110P-201ENST00000516462 101 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 RNA5SP395-201ENST00000516567 118 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 AL590095.2-201ENST00000604136 117 ntBASIC1.15□□□□□ -2.23
KRT40Q6A162 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KRT40Q6A162 RNU6-243P-201ENST00000391140 107 ntBASIC1.14□□□□□ -2.23
KRT40Q6A162 AL606490.4-201ENST00000423117 127 ntBASIC1.14□□□□□ -2.23
KRT40Q6A162 AL161932.1-201ENST00000437408 146 ntBASIC1.14□□□□□ -2.23
KRT40Q6A162 uc_338.16-201ENST00000621804 95 ntBASIC1.14□□□□□ -2.23
KRT40Q6A162 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
KRT40Q6A162 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRT40Q6A162 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRT40Q6A162 RNU6-633P-201ENST00000362612 103 ntBASIC1.13□□□□□ -2.23
KRT40Q6A162 RNU6-957P-201ENST00000363652 99 ntBASIC1.13□□□□□ -2.23
KRT40Q6A162 Y_RNA.283-201ENST00000364798 112 ntBASIC1.13□□□□□ -2.23
KRT40Q6A162 RNU6-1152P-201ENST00000384576 107 ntBASIC1.13□□□□□ -2.23
KRT40Q6A162 Y_RNA.809-201ENST00000516058 95 ntBASIC1.13□□□□□ -2.23
KRT40Q6A162 SNORA31.14-201ENST00000516728 116 ntBASIC1.13□□□□□ -2.23
KRT40Q6A162 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.13□□□□□ -2.23
KRT40Q6A162 RNU6-1260P-201ENST00000362944 107 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 RNU6-509P-201ENST00000363519 107 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 RNU6-820P-201ENST00000384273 107 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 RNU6-519P-201ENST00000410590 108 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 FABP5P4-201ENST00000437203 171 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 AC097635.1-201ENST00000450678 155 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 U7.7-201ENST00000459276 60 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 HAR1A.1-201ENST00000459583 118 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 AC022137.1-201ENST00000483735 151 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 RNU7-10P-201ENST00000607194 63 ntBASIC1.12□□□□□ -2.23
KRT40Q6A162 RNY1P1-201ENST00000364372 112 ntBASIC1.11□□□□□ -2.23
KRT40Q6A162 RNA5SP173-201ENST00000364857 136 ntBASIC1.11□□□□□ -2.23
KRT40Q6A162 SNORD105-201ENST00000386910 85 ntBASIC1.11□□□□□ -2.23
KRT40Q6A162 AC244505.6-201ENST00000452829 130 ntBASIC1.11□□□□□ -2.23
KRT40Q6A162 MIR599-201ENST00000385069 95 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 AC002350.1-201ENST00000490759 375 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 AC138907.6-201ENST00000568401 126 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 AC138869.1-201ENST00000568623 124 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 IGLL4P-201ENST00000614590 133 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 MIR548BB-201ENST00000626714 66 ntBASIC1.1□□□□□ -2.23
KRT40Q6A162 RNU6-979P-201ENST00000383896 107 ntBASIC1.09□□□□□ -2.23
KRT40Q6A162 RNU6-573P-201ENST00000383938 106 ntBASIC1.09□□□□□ -2.23
KRT40Q6A162 RNA5SP255-201ENST00000516370 107 ntBASIC1.09□□□□□ -2.23
KRT40Q6A162 MIR4714-201ENST00000580728 77 ntBASIC1.09□□□□□ -2.23
KRT40Q6A162 MIR5588-201ENST00000581890 63 ntBASIC1.09□□□□□ -2.23
KRT40Q6A162 RNA5SP257-201ENST00000363023 116 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 RNU6-132P-201ENST00000383863 107 ntBASIC1.08□□□□□ -2.24
KRT40Q6A162 RNU6-524P-201ENST00000384270 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms