Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC104985.2-201ENST00000620598 500 ntBASIC-1.53□□□□□ -2.65
RFX7Q2KHR2 MTND4LP32-201ENST00000636111 270 ntBASIC-1.53□□□□□ -2.65
RFX7Q2KHR2 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 SNORD101-201ENST00000384027 73 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 MIR1277-201ENST00000408536 78 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 SNORD75.2-201ENST00000408784 58 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 MIR3908-201ENST00000579798 126 ntBASIC-1.54□□□□□ -2.66
RFX7Q2KHR2 SNORD36A-201ENST00000362874 73 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 SNORA63.7-201ENST00000365579 123 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 RNU6-616P-201ENST00000384353 107 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 MIR34C-201ENST00000384831 77 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 RPL35AP4-201ENST00000412007 102 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 MTND1P29-201ENST00000448112 647 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 RNU6-240P-201ENST00000516098 97 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 AC084781.2-201ENST00000615568 161 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 AC090574.1-201ENST00000623186 233 ntBASIC-1.55□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 RNU6-957P-201ENST00000363652 99 ntBASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 SNORD115-27-201ENST00000364430 82 ntBASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.56□□□□□ -2.66
RFX7Q2KHR2 RNU6-103P-201ENST00000363686 107 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 RNY4P7-201ENST00000364600 96 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 RNU6-54P-201ENST00000365563 107 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 RNU7-123P-201ENST00000515911 60 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 RNU6-168P-201ENST00000516189 101 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 MIR664B-201ENST00000626756 61 ntBASIC-1.57□□□□□ -2.66
RFX7Q2KHR2 RNU6-664P-201ENST00000362381 107 ntBASIC-1.58□□□□□ -2.66
RFX7Q2KHR2 SNORD116-6-201ENST00000384711 96 ntBASIC-1.58□□□□□ -2.66
RFX7Q2KHR2 RNU6-381P-201ENST00000391259 108 ntBASIC-1.58□□□□□ -2.66
RFX7Q2KHR2 MIR548H3-201ENST00000408771 118 ntBASIC-1.58□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.58□□□□□ -2.66
RFX7Q2KHR2 MIR4696-201ENST00000581431 70 ntBASIC-1.58□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 SNORD116-1-201ENST00000384335 95 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 RNU6-935P-201ENST00000410371 100 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 AC138393.2-201ENST00000414742 246 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 AC090616.4-201ENST00000448026 115 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 AP002795.1-201ENST00000534879 84 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 MIR496-201ENST00000385226 102 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 MIR1302-11-201ENST00000408051 138 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 MIR1302-9-201ENST00000408365 138 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 MIR1302-10-201ENST00000408734 138 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 RNU6-718P-201ENST00000516166 105 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 MIR3139-201ENST00000579145 76 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 MIR1302-2-201ENST00000607096 138 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.59□□□□□ -2.66
RFX7Q2KHR2 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.6□□□□□ -2.67
RFX7Q2KHR2 MTATP6P21-201ENST00000440681 189 ntBASIC-1.6□□□□□ -2.67
RFX7Q2KHR2 RNA5SP236-201ENST00000516169 116 ntBASIC-1.6□□□□□ -2.67
RFX7Q2KHR2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.6□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.6□□□□□ -2.67
RFX7Q2KHR2 AC108081.1-201ENST00000604358 221 ntBASIC-1.6□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 RNU4-17P-201ENST00000365598 141 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 U3.27-201ENST00000391237 200 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 AL353691.2-201ENST00000443795 59 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 SNORA40.15-201ENST00000516884 107 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 AC090617.8-201ENST00000623339 167 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 AC073869.6-201ENST00000640656 341 ntBASIC-1.61□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 RNU6-924P-201ENST00000362926 108 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 SNORA63.6-201ENST00000364921 119 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 SNORD116-29-201ENST00000384516 83 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 AC113618.1-201ENST00000416747 285 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 AC069439.1-201ENST00000494739 167 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 RNU6-976P-201ENST00000516086 111 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.62□□□□□ -2.67
RFX7Q2KHR2 MIR4744-201ENST00000581563 82 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms