Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 AC104996.3-201ENST00000590718 94 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ITGA1P56199 MIR100-201ENST00000385259 80 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 RNU7-102P-201ENST00000458948 62 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 AC138907.6-201ENST00000568401 126 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 AC138869.1-201ENST00000568623 124 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 MIR4804-201ENST00000581683 73 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
ITGA1P56199 RNU6-291P-201ENST00000384720 107 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 RNU6-535P-201ENST00000384722 107 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 RNU6-129P-201ENST00000391022 107 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 SNORA18.5-201ENST00000516616 101 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 RNA5SP102-201ENST00000516865 106 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 TRDV1-202ENST00000621643 102 ntBASIC1.35□□□□□ -2.19
ITGA1P56199 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ITGA1P56199 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ITGA1P56199 MIR1-1-201ENST00000362147 71 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 MIRLET7F1-201ENST00000362202 87 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 RNU6-315P-201ENST00000362666 107 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 RNU6-624P-201ENST00000363411 107 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 Y_RNA.491-201ENST00000384417 107 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 MIR599-201ENST00000385069 95 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.34□□□□□ -2.19
ITGA1P56199 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ITGA1P56199 Y_RNA.221-201ENST00000364248 96 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 RNU1-119P-201ENST00000391122 165 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 AL606490.4-201ENST00000423117 127 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 AC067940.1-201ENST00000458411 300 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 RNU7-56P-201ENST00000458744 62 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 AL078603.1-201ENST00000603824 313 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 AC008608.1-201ENST00000603910 127 ntBASIC1.33□□□□□ -2.2
ITGA1P56199 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 RNU6-478P-201ENST00000363904 110 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 RNU6-42P-201ENST00000384165 107 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ITGA1P56199 MIR1827-201ENST00000408549 66 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 AL450471.1-201ENST00000447509 127 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
ITGA1P56199 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
ITGA1P56199 RNA5SP245-201ENST00000364239 121 ntBASIC1.31□□□□□ -2.2
ITGA1P56199 MIR520F-201ENST00000384824 87 ntBASIC1.31□□□□□ -2.2
ITGA1P56199 MIR6734-201ENST00000621166 68 ntBASIC1.31□□□□□ -2.2
ITGA1P56199 SNORA63.2-201ENST00000362603 126 ntBASIC1.3□□□□□ -2.2
ITGA1P56199 SNORA25-201ENST00000384384 134 ntBASIC1.3□□□□□ -2.2
ITGA1P56199 AC002429.1-201ENST00000437672 148 ntBASIC1.3□□□□□ -2.2
ITGA1P56199 FGF7P7-201ENST00000514120 227 ntBASIC1.3□□□□□ -2.2
ITGA1P56199 RNU6-557P-201ENST00000516842 110 ntBASIC1.3□□□□□ -2.2
ITGA1P56199 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
ITGA1P56199 RNU6-1296P-201ENST00000383879 107 ntBASIC1.29□□□□□ -2.2
ITGA1P56199 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
ITGA1P56199 RNA5SP220-201ENST00000516298 104 ntBASIC1.29□□□□□ -2.2
ITGA1P56199 U6.100-201ENST00000636230 99 ntBASIC1.29□□□□□ -2.2
ITGA1P56199 MIR4662A-201ENST00000637499 67 ntBASIC1.29□□□□□ -2.2
ITGA1P56199 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ITGA1P56199 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ITGA1P56199 Y_RNA.239-201ENST00000364444 113 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 SNORD101-201ENST00000384027 73 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
ITGA1P56199 AC244505.6-201ENST00000452829 130 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 Y_RNA.660-201ENST00000516002 120 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 RNU6-1265P-201ENST00000516342 103 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.2
ITGA1P56199 RNU6-664P-201ENST00000362381 107 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 RNU6-161P-201ENST00000363051 106 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 RNU6-776P-201ENST00000364403 104 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 RNU6-686P-201ENST00000364839 107 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 RNU6-1022P-201ENST00000365049 104 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 RNU6-1108P-201ENST00000516308 104 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 MIR4696-201ENST00000581431 70 ntBASIC1.27□□□□□ -2.21
ITGA1P56199 RNU6-1094P-201ENST00000362416 104 ntBASIC1.26□□□□□ -2.21
ITGA1P56199 Y_RNA.32-201ENST00000362589 110 ntBASIC1.26□□□□□ -2.21
ITGA1P56199 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
ITGA1P56199 Y_RNA.596-201ENST00000410462 109 ntBASIC1.26□□□□□ -2.21
ITGA1P56199 MTRNR2L2-201ENST00000604882 87 ntBASIC1.26□□□□□ -2.21
ITGA1P56199 MIRLET7A1-201ENST00000362295 80 ntBASIC1.25□□□□□ -2.21
ITGA1P56199 Y_RNA.174-201ENST00000363781 105 ntBASIC1.25□□□□□ -2.21
ITGA1P56199 SNORD77.2-201ENST00000391045 68 ntBASIC1.25□□□□□ -2.21
ITGA1P56199 SNORD90-201ENST00000391145 111 ntBASIC1.25□□□□□ -2.21
ITGA1P56199 SNORA31.14-201ENST00000516728 116 ntBASIC1.25□□□□□ -2.21
ITGA1P56199 uc_338.16-201ENST00000621804 95 ntBASIC1.25□□□□□ -2.21
ITGA1P56199 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
ITGA1P56199 MIR7-2-201ENST00000384970 110 ntBASIC1.24□□□□□ -2.21
ITGA1P56199 MIR520H-201ENST00000385126 88 ntBASIC1.24□□□□□ -2.21
ITGA1P56199 RNU6-380P-201ENST00000410207 107 ntBASIC1.24□□□□□ -2.21
ITGA1P56199 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.24□□□□□ -2.21
ITGA1P56199 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
ITGA1P56199 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
ITGA1P56199 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
ITGA1P56199 AC145423.2-201ENST00000610631 239 ntBASIC1.23□□□□□ -2.21
ITGA1P56199 AL136317.1-201ENST00000612653 226 ntBASIC1.23□□□□□ -2.21
ITGA1P56199 RNU6-208P-201ENST00000362431 107 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 253.5 ms