Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 RNU6-687P-201ENST00000516443 89 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 Y_RNA.697-201ENST00000516776 113 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 YWHAEP2-201ENST00000580066 112 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 MIR4696-201ENST00000581431 70 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 YWHAEP3-201ENST00000582767 121 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 U6.100-201ENST00000636230 99 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 RNU6-664P-201ENST00000362381 107 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 Y_RNA.12-201ENST00000362393 112 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 SNORD101-201ENST00000384027 73 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 AC048334.1-201ENST00000477975 159 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 RNU6-1265P-201ENST00000516342 103 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 RNU6-70P-201ENST00000516438 60 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 AC138907.6-201ENST00000568401 126 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 AC138869.1-201ENST00000568623 124 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 MIR4771-2-201ENST00000577758 74 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 MIR4771-1-201ENST00000582617 74 ntBASIC1.53□□□□□ -2.16
EPHB3P54753 Y_RNA.330-201ENST00000365230 109 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 RNY4P3-201ENST00000365254 95 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 SNORD111-201ENST00000408139 94 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 snoU13.17-201ENST00000458802 104 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 RNU6-634P-201ENST00000459134 106 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 AC106800.4-201ENST00000614905 153 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
EPHB3P54753 Y_RNA.207-201ENST00000364142 106 ntBASIC1.51□□□□□ -2.17
EPHB3P54753 MIR599-201ENST00000385069 95 ntBASIC1.51□□□□□ -2.17
EPHB3P54753 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.51□□□□□ -2.17
EPHB3P54753 Y_RNA.36-201ENST00000362602 112 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 Y_RNA.363-201ENST00000365529 113 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 RNU6-587P-201ENST00000391282 106 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 MIR942-201ENST00000401111 86 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 Y_RNA.596-201ENST00000410462 109 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 RPS26P5-201ENST00000418544 335 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 SNORA31.2-201ENST00000516019 134 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 RNU7-156P-201ENST00000517214 74 ntBASIC1.5□□□□□ -2.17
EPHB3P54753 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 RNU6-935P-201ENST00000410371 100 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 RNU7-40P-201ENST00000516397 64 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 MIR4676-201ENST00000583078 72 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
EPHB3P54753 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
EPHB3P54753 RNU6-369P-201ENST00000362515 102 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 RNU6-340P-201ENST00000364005 107 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
EPHB3P54753 SNORA24B-201ENST00000384176 131 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 RNU6-291P-201ENST00000384720 107 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 AC244505.6-201ENST00000452829 130 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 RNU7-21P-201ENST00000459430 62 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 MIR664A-201ENST00000626086 82 ntBASIC1.48□□□□□ -2.17
EPHB3P54753 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
EPHB3P54753 RNU6-154P-201ENST00000384306 106 ntBASIC1.47□□□□□ -2.17
EPHB3P54753 Y_RNA.606-201ENST00000410579 103 ntBASIC1.47□□□□□ -2.17
EPHB3P54753 AL591704.2-201ENST00000421658 181 ntBASIC1.47□□□□□ -2.17
EPHB3P54753 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.47□□□□□ -2.17
EPHB3P54753 MIR3140-201ENST00000583685 90 ntBASIC1.47□□□□□ -2.17
EPHB3P54753 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
EPHB3P54753 Y_RNA.226-201ENST00000364337 114 ntBASIC1.46□□□□□ -2.18
EPHB3P54753 RNU6-535P-201ENST00000384722 107 ntBASIC1.46□□□□□ -2.18
EPHB3P54753 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
EPHB3P54753 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
EPHB3P54753 MIR938-201ENST00000401216 83 ntBASIC1.46□□□□□ -2.18
EPHB3P54753 RNU2-59P-201ENST00000410482 191 ntBASIC1.46□□□□□ -2.18
EPHB3P54753 MIR8070-201ENST00000616510 88 ntBASIC1.46□□□□□ -2.18
EPHB3P54753 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
EPHB3P54753 RNU6-364P-201ENST00000384387 107 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 SNORA80D-201ENST00000384488 135 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 RNU6-1241P-201ENST00000384536 107 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.45□□□□□ -2.18
EPHB3P54753 AC023827.1-201ENST00000569247 97 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 AC008608.1-201ENST00000603910 127 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 U6.81-201ENST00000612550 106 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
EPHB3P54753 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
EPHB3P54753 RNU6-330P-201ENST00000363015 107 ntBASIC1.44□□□□□ -2.18
EPHB3P54753 SNORA8.1-201ENST00000384250 140 ntBASIC1.44□□□□□ -2.18
EPHB3P54753 AC097510.1-201ENST00000510945 133 ntBASIC1.44□□□□□ -2.18
EPHB3P54753 MIR4804-201ENST00000581683 73 ntBASIC1.44□□□□□ -2.18
EPHB3P54753 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.44□□□□□ -2.18
EPHB3P54753 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
EPHB3P54753 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
EPHB3P54753 RNU6-681P-201ENST00000364012 104 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 RNU6-540P-201ENST00000384622 101 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 MIR451A-201ENST00000385059 72 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 MIR1287-201ENST00000408492 90 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 RNU7-102P-201ENST00000458948 62 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.43□□□□□ -2.18
EPHB3P54753 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms