Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Y_RNA.57-201ENST00000362806 113 ntBASIC0.78□□□□□ -2.28
KRT9P35527 SNORD116-22-201ENST00000384430 92 ntBASIC0.78□□□□□ -2.28
KRT9P35527 MIR125B2-201ENST00000385128 89 ntBASIC0.78□□□□□ -2.28
KRT9P35527 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
KRT9P35527 Y_RNA.588-201ENST00000391254 102 ntBASIC0.78□□□□□ -2.28
KRT9P35527 MIR1302-4-201ENST00000408701 150 ntBASIC0.78□□□□□ -2.28
KRT9P35527 RNU6-977P-201ENST00000516411 103 ntBASIC0.78□□□□□ -2.28
KRT9P35527 RNU6-850P-201ENST00000516934 103 ntBASIC0.78□□□□□ -2.28
KRT9P35527 RNU7-156P-201ENST00000517214 74 ntBASIC0.78□□□□□ -2.28
KRT9P35527 IGLL4P-201ENST00000614590 133 ntBASIC0.78□□□□□ -2.28
KRT9P35527 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.78□□□□□ -2.28
KRT9P35527 Y_RNA.17-201ENST00000362433 111 ntBASIC0.77□□□□□ -2.29
KRT9P35527 RNU6-364P-201ENST00000384387 107 ntBASIC0.77□□□□□ -2.29
KRT9P35527 MIR450A2-201ENST00000385022 100 ntBASIC0.77□□□□□ -2.29
KRT9P35527 SNORA26.2-201ENST00000390922 122 ntBASIC0.77□□□□□ -2.29
KRT9P35527 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
KRT9P35527 SNRPGP12-201ENST00000449481 213 ntBASIC0.77□□□□□ -2.29
KRT9P35527 AC020891.4-201ENST00000605745 93 ntBASIC0.77□□□□□ -2.29
KRT9P35527 MIR6082-201ENST00000613604 109 ntBASIC0.77□□□□□ -2.29
KRT9P35527 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
KRT9P35527 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
KRT9P35527 Y_RNA.13-201ENST00000362403 112 ntBASIC0.76□□□□□ -2.29
KRT9P35527 RNY1P1-201ENST00000364372 112 ntBASIC0.76□□□□□ -2.29
KRT9P35527 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRT9P35527 RNU6-820P-201ENST00000384273 107 ntBASIC0.76□□□□□ -2.29
KRT9P35527 MIR520F-201ENST00000384824 87 ntBASIC0.76□□□□□ -2.29
KRT9P35527 MIR635-201ENST00000384830 98 ntBASIC0.76□□□□□ -2.29
KRT9P35527 MIR938-201ENST00000401216 83 ntBASIC0.76□□□□□ -2.29
KRT9P35527 RNU6-1194P-201ENST00000516208 104 ntBASIC0.76□□□□□ -2.29
KRT9P35527 AL513043.2-201ENST00000573941 143 ntBASIC0.76□□□□□ -2.29
KRT9P35527 MIR4676-201ENST00000583078 72 ntBASIC0.76□□□□□ -2.29
KRT9P35527 RNU7-10P-201ENST00000607194 63 ntBASIC0.76□□□□□ -2.29
KRT9P35527 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
KRT9P35527 MIR520H-201ENST00000385126 88 ntBASIC0.75□□□□□ -2.29
KRT9P35527 Y_RNA.609-201ENST00000410669 89 ntBASIC0.75□□□□□ -2.29
KRT9P35527 RNU6-762P-201ENST00000517107 102 ntBASIC0.75□□□□□ -2.29
KRT9P35527 MIR548H5-201ENST00000580314 60 ntBASIC0.75□□□□□ -2.29
KRT9P35527 AC025521.1-201ENST00000621624 286 ntBASIC0.75□□□□□ -2.29
KRT9P35527 MIR494-201ENST00000349529 81 ntBASIC0.74□□□□□ -2.29
KRT9P35527 Y_RNA.56-201ENST00000362798 112 ntBASIC0.74□□□□□ -2.29
KRT9P35527 MIR516A2-201ENST00000384888 90 ntBASIC0.74□□□□□ -2.29
KRT9P35527 MIR516A1-201ENST00000385033 90 ntBASIC0.74□□□□□ -2.29
KRT9P35527 RNU6-243P-201ENST00000391140 107 ntBASIC0.74□□□□□ -2.29
KRT9P35527 RNU6-1254P-201ENST00000391266 104 ntBASIC0.74□□□□□ -2.29
KRT9P35527 SNORD100-201ENST00000408573 76 ntBASIC0.74□□□□□ -2.29
KRT9P35527 RNY4P29-201ENST00000410801 97 ntBASIC0.74□□□□□ -2.29
KRT9P35527 RNA5SP222-201ENST00000411039 105 ntBASIC0.74□□□□□ -2.29
KRT9P35527 Y_RNA.697-201ENST00000516776 113 ntBASIC0.74□□□□□ -2.29
KRT9P35527 RNU6-765P-201ENST00000516916 99 ntBASIC0.74□□□□□ -2.29
KRT9P35527 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
KRT9P35527 MIR4668-201ENST00000582284 70 ntBASIC0.74□□□□□ -2.29
KRT9P35527 Y_RNA.536-201ENST00000384621 113 ntBASIC0.73□□□□□ -2.29
KRT9P35527 MIR573-201ENST00000384964 99 ntBASIC0.73□□□□□ -2.29
KRT9P35527 Y_RNA.593-201ENST00000410292 98 ntBASIC0.73□□□□□ -2.29
KRT9P35527 RNU6-519P-201ENST00000410590 108 ntBASIC0.73□□□□□ -2.29
KRT9P35527 RNU6-402P-201ENST00000410678 103 ntBASIC0.73□□□□□ -2.29
KRT9P35527 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.73□□□□□ -2.29
KRT9P35527 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.73□□□□□ -2.29
KRT9P35527 SNORD92-201ENST00000585078 85 ntBASIC0.73□□□□□ -2.29
KRT9P35527 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
KRT9P35527 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
KRT9P35527 MIR193B-201ENST00000384907 83 ntBASIC0.72□□□□□ -2.29
KRT9P35527 SNORD63B-201ENST00000411005 70 ntBASIC0.72□□□□□ -2.29
KRT9P35527 AL161932.1-201ENST00000437408 146 ntBASIC0.72□□□□□ -2.29
KRT9P35527 RNU7-56P-201ENST00000458744 62 ntBASIC0.72□□□□□ -2.29
KRT9P35527 RNU7-102P-201ENST00000458948 62 ntBASIC0.72□□□□□ -2.29
KRT9P35527 RNU7-106P-201ENST00000459514 67 ntBASIC0.72□□□□□ -2.29
KRT9P35527 RN7SKP12-201ENST00000516275 143 ntBASIC0.72□□□□□ -2.29
KRT9P35527 AC062037.1-201ENST00000605302 128 ntBASIC0.72□□□□□ -2.29
KRT9P35527 Y_RNA.42-201ENST00000362660 108 ntBASIC0.71□□□□□ -2.3
KRT9P35527 SNORD36A-201ENST00000362874 73 ntBASIC0.71□□□□□ -2.3
KRT9P35527 Y_RNA.388-201ENST00000383919 113 ntBASIC0.71□□□□□ -2.3
KRT9P35527 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
KRT9P35527 Y_RNA.620-201ENST00000411009 88 ntBASIC0.71□□□□□ -2.3
KRT9P35527 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
KRT9P35527 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.71□□□□□ -2.3
KRT9P35527 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.71□□□□□ -2.3
KRT9P35527 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRT9P35527 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRT9P35527 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
KRT9P35527 RNU6-242P-201ENST00000384359 107 ntBASIC0.7□□□□□ -2.3
KRT9P35527 Y_RNA.648-201ENST00000459455 110 ntBASIC0.7□□□□□ -2.3
KRT9P35527 TRAJ51-201ENST00000504127 63 ntBASIC0.7□□□□□ -2.3
KRT9P35527 Y_RNA.809-201ENST00000516058 95 ntBASIC0.7□□□□□ -2.3
KRT9P35527 RNU6-267P-201ENST00000516714 103 ntBASIC0.7□□□□□ -2.3
KRT9P35527 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
KRT9P35527 AC138869.1-201ENST00000568623 124 ntBASIC0.7□□□□□ -2.3
KRT9P35527 MIR4536-1-201ENST00000583537 88 ntBASIC0.7□□□□□ -2.3
KRT9P35527 AC008608.1-201ENST00000603910 127 ntBASIC0.7□□□□□ -2.3
KRT9P35527 RNU6-219P-201ENST00000364728 107 ntBASIC0.69□□□□□ -2.3
KRT9P35527 RNA5SP173-201ENST00000364857 136 ntBASIC0.69□□□□□ -2.3
KRT9P35527 RNU6-675P-201ENST00000384236 104 ntBASIC0.69□□□□□ -2.3
KRT9P35527 RNU6-466P-201ENST00000391224 103 ntBASIC0.69□□□□□ -2.3
KRT9P35527 RNU7-195P-201ENST00000458793 62 ntBASIC0.69□□□□□ -2.3
KRT9P35527 SNORD4B-201ENST00000459083 72 ntBASIC0.69□□□□□ -2.3
KRT9P35527 AC022137.1-201ENST00000483735 151 ntBASIC0.69□□□□□ -2.3
KRT9P35527 RNU6-65P-201ENST00000516332 98 ntBASIC0.69□□□□□ -2.3
KRT9P35527 RNU6-448P-201ENST00000517052 107 ntBASIC0.69□□□□□ -2.3
KRT9P35527 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.69□□□□□ -2.3
KRT9P35527 RNU6-633P-201ENST00000362612 103 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms