Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 Y_RNA.363-201ENST00000365529 113 ntBASIC1.94□□□□□ -2.1
GPC1P35052 MIR9-2-201ENST00000384838 87 ntBASIC1.94□□□□□ -2.1
GPC1P35052 AL591704.2-201ENST00000421658 181 ntBASIC1.94□□□□□ -2.1
GPC1P35052 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
GPC1P35052 AL078603.1-201ENST00000603824 313 ntBASIC1.94□□□□□ -2.1
GPC1P35052 RNU6-382P-201ENST00000365181 106 ntBASIC1.93□□□□□ -2.1
GPC1P35052 Y_RNA.443-201ENST00000384135 111 ntBASIC1.93□□□□□ -2.1
GPC1P35052 MIR100-201ENST00000385259 80 ntBASIC1.93□□□□□ -2.1
GPC1P35052 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
GPC1P35052 AC244505.6-201ENST00000452829 130 ntBASIC1.93□□□□□ -2.1
GPC1P35052 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.93□□□□□ -2.1
GPC1P35052 SNORD113.1-201ENST00000363280 73 ntBASIC1.92□□□□□ -2.1
GPC1P35052 SNORA25.4-201ENST00000363666 124 ntBASIC1.92□□□□□ -2.1
GPC1P35052 RNU1-119P-201ENST00000391122 165 ntBASIC1.92□□□□□ -2.1
GPC1P35052 U3.27-201ENST00000391237 200 ntBASIC1.92□□□□□ -2.1
GPC1P35052 RNU7-13P-201ENST00000516413 62 ntBASIC1.92□□□□□ -2.1
GPC1P35052 MIR1273D-201ENST00000577266 86 ntBASIC1.92□□□□□ -2.1
GPC1P35052 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
GPC1P35052 RNU6-1216P-201ENST00000362590 107 ntBASIC1.91□□□□□ -2.1
GPC1P35052 Y_RNA.258-201ENST00000364613 105 ntBASIC1.91□□□□□ -2.1
GPC1P35052 AC244098.3-201ENST00000424803 96 ntBASIC1.91□□□□□ -2.1
GPC1P35052 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
GPC1P35052 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
GPC1P35052 MIR4804-201ENST00000581683 73 ntBASIC1.91□□□□□ -2.1
GPC1P35052 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
GPC1P35052 SNORD115-44-201ENST00000365391 82 ntBASIC1.9□□□□□ -2.11
GPC1P35052 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
GPC1P35052 RNU6-910P-201ENST00000390844 107 ntBASIC1.9□□□□□ -2.11
GPC1P35052 AL691482.2-201ENST00000457453 84 ntBASIC1.9□□□□□ -2.11
GPC1P35052 RNU7-21P-201ENST00000459430 62 ntBASIC1.9□□□□□ -2.11
GPC1P35052 MIR4648-201ENST00000580107 72 ntBASIC1.9□□□□□ -2.11
GPC1P35052 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.9□□□□□ -2.11
GPC1P35052 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
GPC1P35052 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
GPC1P35052 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GPC1P35052 RNA5SP432-201ENST00000362480 116 ntBASIC1.89□□□□□ -2.11
GPC1P35052 SNORD115-24-201ENST00000363528 82 ntBASIC1.89□□□□□ -2.11
GPC1P35052 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
GPC1P35052 snoU13.15-201ENST00000459407 104 ntBASIC1.89□□□□□ -2.11
GPC1P35052 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
GPC1P35052 MIR1-1-201ENST00000362147 71 ntBASIC1.88□□□□□ -2.11
GPC1P35052 RNU6-369P-201ENST00000362515 102 ntBASIC1.88□□□□□ -2.11
GPC1P35052 Y_RNA.32-201ENST00000362589 110 ntBASIC1.88□□□□□ -2.11
GPC1P35052 SNORA80D-201ENST00000384488 135 ntBASIC1.88□□□□□ -2.11
GPC1P35052 MIR520F-201ENST00000384824 87 ntBASIC1.88□□□□□ -2.11
GPC1P35052 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
GPC1P35052 SNORA31.14-201ENST00000516728 116 ntBASIC1.88□□□□□ -2.11
GPC1P35052 SNORD116-24-201ENST00000384549 92 ntBASIC1.87□□□□□ -2.11
GPC1P35052 MTND4LP19-201ENST00000403051 166 ntBASIC1.87□□□□□ -2.11
GPC1P35052 RNU7-56P-201ENST00000458744 62 ntBASIC1.87□□□□□ -2.11
GPC1P35052 RNU7-90P-201ENST00000459216 62 ntBASIC1.87□□□□□ -2.11
GPC1P35052 RNU6-752P-201ENST00000516376 102 ntBASIC1.87□□□□□ -2.11
GPC1P35052 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
GPC1P35052 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
GPC1P35052 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
GPC1P35052 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.86□□□□□ -2.11
GPC1P35052 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GPC1P35052 RNU1-78P-201ENST00000391248 165 ntBASIC1.85□□□□□ -2.11
GPC1P35052 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
GPC1P35052 MIR1289-2-201ENST00000408360 111 ntBASIC1.85□□□□□ -2.11
GPC1P35052 RNU7-104P-201ENST00000459398 79 ntBASIC1.85□□□□□ -2.11
GPC1P35052 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
GPC1P35052 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
GPC1P35052 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.84□□□□□ -2.11
GPC1P35052 AC067940.1-201ENST00000458411 300 ntBASIC1.84□□□□□ -2.11
GPC1P35052 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
GPC1P35052 uc_338.16-201ENST00000621804 95 ntBASIC1.84□□□□□ -2.11
GPC1P35052 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
GPC1P35052 RNU6-1126P-201ENST00000384002 107 ntBASIC1.83□□□□□ -2.12
GPC1P35052 MIR504-201ENST00000385065 83 ntBASIC1.83□□□□□ -2.12
GPC1P35052 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.83□□□□□ -2.12
GPC1P35052 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.83□□□□□ -2.12
GPC1P35052 NAMPTP3-201ENST00000569273 224 ntBASIC1.83□□□□□ -2.12
GPC1P35052 MIR548AG2-201ENST00000581228 64 ntBASIC1.83□□□□□ -2.12
GPC1P35052 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GPC1P35052 Y_RNA.174-201ENST00000363781 105 ntBASIC1.82□□□□□ -2.12
GPC1P35052 MIR203A-201ENST00000384836 110 ntBASIC1.82□□□□□ -2.12
GPC1P35052 SNORD75.2-201ENST00000408784 58 ntBASIC1.82□□□□□ -2.12
GPC1P35052 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GPC1P35052 RNU6-982P-201ENST00000516216 102 ntBASIC1.82□□□□□ -2.12
GPC1P35052 RNU7-161P-201ENST00000517289 62 ntBASIC1.82□□□□□ -2.12
GPC1P35052 AL109933.3-201ENST00000619095 188 ntBASIC1.82□□□□□ -2.12
GPC1P35052 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
GPC1P35052 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
GPC1P35052 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
GPC1P35052 RNA5SP403-201ENST00000363598 108 ntBASIC1.81□□□□□ -2.12
GPC1P35052 SNORD79.1-201ENST00000516069 84 ntBASIC1.81□□□□□ -2.12
GPC1P35052 MIR3920-201ENST00000581751 86 ntBASIC1.81□□□□□ -2.12
GPC1P35052 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.81□□□□□ -2.12
GPC1P35052 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
GPC1P35052 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
GPC1P35052 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
GPC1P35052 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
GPC1P35052 MIR4511-201ENST00000582784 87 ntBASIC1.8□□□□□ -2.12
GPC1P35052 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
GPC1P35052 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
GPC1P35052 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.8□□□□□ -2.12
GPC1P35052 MIR6509-201ENST00000614603 85 ntBASIC1.8□□□□□ -2.12
GPC1P35052 ZNF355P-201ENST00000427301 3216 ntBASIC1.8□□□□□ -2.12
GPC1P35052 MIR4524B-201ENST00000581569 115 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms