Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 snoU13.17-201ENST00000458802 104 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 SCARNA18B-201ENST00000458806 135 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 MIR4796-201ENST00000580742 81 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SNHG28P0DPA3 RNU4-58P-201ENST00000363192 141 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 RNU6-448P-201ENST00000517052 107 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 MIR4771-2-201ENST00000577758 74 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 MIR4771-1-201ENST00000582617 74 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 MIR4536-1-201ENST00000583537 88 ntBASIC1.1□□□□□ -2.23
SNHG28P0DPA3 MIRLET7A1-201ENST00000362295 80 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 RNU6-161P-201ENST00000363051 106 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 RNU6-1296P-201ENST00000383879 107 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 RNU6-811P-201ENST00000384069 107 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 MIR125B2-201ENST00000385128 89 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 RNU6-129P-201ENST00000391022 107 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 RNU6-243P-201ENST00000391140 107 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.697-201ENST00000516776 113 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 RN7SKP88-201ENST00000516847 250 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 AC104996.3-201ENST00000590718 94 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 7SK.8-201ENST00000612110 250 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 AC106800.4-201ENST00000614905 153 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 7SK.11-201ENST00000615477 250 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 7SK.13-201ENST00000622040 250 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 U6.100-201ENST00000636230 99 ntBASIC1.09□□□□□ -2.23
SNHG28P0DPA3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
SNHG28P0DPA3 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 RPS26P5-201ENST00000418544 335 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 MIR2113-201ENST00000459007 91 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 MIR4676-201ENST00000583078 72 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
SNHG28P0DPA3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SNHG28P0DPA3 SNORD115-37-201ENST00000363768 82 ntBASIC1.07□□□□□ -2.24
SNHG28P0DPA3 RNU6-291P-201ENST00000384720 107 ntBASIC1.07□□□□□ -2.24
SNHG28P0DPA3 MIR518E-201ENST00000385252 88 ntBASIC1.07□□□□□ -2.24
SNHG28P0DPA3 MIR1257-201ENST00000408490 117 ntBASIC1.07□□□□□ -2.24
SNHG28P0DPA3 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
SNHG28P0DPA3 RNU6-902P-201ENST00000517212 91 ntBASIC1.07□□□□□ -2.24
SNHG28P0DPA3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.07□□□□□ -2.24
SNHG28P0DPA3 RNU6-315P-201ENST00000362666 107 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 Y_RNA.565-201ENST00000384719 101 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 MIR635-201ENST00000384830 98 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 MIR519A1-201ENST00000385257 85 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SNHG28P0DPA3 MIR3134-201ENST00000579433 74 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 MIR3140-201ENST00000583685 90 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 TRDV1-202ENST00000621643 102 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 MIR664A-201ENST00000626086 82 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 MIR4662A-201ENST00000637499 67 ntBASIC1.06□□□□□ -2.24
SNHG28P0DPA3 RNU6-1260P-201ENST00000362944 107 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.05□□□□□ -2.24
SNHG28P0DPA3 RNU7-56P-201ENST00000458744 62 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 RNU7-102P-201ENST00000458948 62 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 AC139453.2-201ENST00000487255 133 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 Y_RNA.809-201ENST00000516058 95 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 RNU6-557P-201ENST00000516842 110 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 MIR4696-201ENST00000581431 70 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 MIR4804-201ENST00000581683 73 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 SNORD92-201ENST00000585078 85 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 AC145423.2-201ENST00000610631 239 ntBASIC1.05□□□□□ -2.24
SNHG28P0DPA3 SNORD33-201ENST00000362761 85 ntBASIC1.04□□□□□ -2.24
SNHG28P0DPA3 SNORD111-201ENST00000408139 94 ntBASIC1.04□□□□□ -2.24
SNHG28P0DPA3 RNU6-765P-201ENST00000516916 99 ntBASIC1.04□□□□□ -2.24
SNHG28P0DPA3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
SNHG28P0DPA3 MIR101-2-201ENST00000362195 79 ntBASIC1.03□□□□□ -2.24
SNHG28P0DPA3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
SNHG28P0DPA3 RNU6-466P-201ENST00000391224 103 ntBASIC1.03□□□□□ -2.24
SNHG28P0DPA3 MIR4484-201ENST00000582855 83 ntBASIC1.03□□□□□ -2.24
SNHG28P0DPA3 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
SNHG28P0DPA3 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.03□□□□□ -2.24
SNHG28P0DPA3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.03□□□□□ -2.24
SNHG28P0DPA3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SNHG28P0DPA3 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 RNU6-330P-201ENST00000363015 107 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 RNU6-686P-201ENST00000364839 107 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.02□□□□□ -2.25
SNHG28P0DPA3 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 MIR548H5-201ENST00000580314 60 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
SNHG28P0DPA3 RNU6-664P-201ENST00000362381 107 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 SNORA24B-201ENST00000384176 131 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
SNHG28P0DPA3 RNU6-535P-201ENST00000384722 107 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms