Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-696P-201ENST00000390834 107 ntBASIC-1.86□□□□□ -2.71
TNFP01375 AC024067.1-201ENST00000426199 223 ntBASIC-1.86□□□□□ -2.71
TNFP01375 RNU7-123P-201ENST00000515911 60 ntBASIC-1.86□□□□□ -2.71
TNFP01375 RNA5SP236-201ENST00000516169 116 ntBASIC-1.86□□□□□ -2.71
TNFP01375 RNU6-561P-201ENST00000516222 102 ntBASIC-1.86□□□□□ -2.71
TNFP01375 RNU6-835P-201ENST00000516974 104 ntBASIC-1.86□□□□□ -2.71
TNFP01375 MTCO2P4-201ENST00000517968 247 ntBASIC-1.86□□□□□ -2.71
TNFP01375 MIR4790-201ENST00000577799 79 ntBASIC-1.86□□□□□ -2.71
TNFP01375 AC073114.1-201ENST00000612027 490 ntBASIC-1.86□□□□□ -2.71
TNFP01375 U6.58-201ENST00000613107 107 ntBASIC-1.86□□□□□ -2.71
TNFP01375 U2.7-201ENST00000619197 100 ntBASIC-1.86□□□□□ -2.71
TNFP01375 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.86□□□□□ -2.71
TNFP01375 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.87□□□□□ -2.71
TNFP01375 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.87□□□□□ -2.71
TNFP01375 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.87□□□□□ -2.71
TNFP01375 MIR513B-201ENST00000385136 84 ntBASIC-1.87□□□□□ -2.71
TNFP01375 MT-TI-201ENST00000387365 69 ntBASIC-1.87□□□□□ -2.71
TNFP01375 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.87□□□□□ -2.71
TNFP01375 AC083798.1-201ENST00000472671 131 ntBASIC-1.87□□□□□ -2.71
TNFP01375 RNA5SP153-201ENST00000516498 76 ntBASIC-1.87□□□□□ -2.71
TNFP01375 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.87□□□□□ -2.71
TNFP01375 MIR1244-1-201ENST00000612829 85 ntBASIC-1.87□□□□□ -2.71
TNFP01375 MIR1244-3-201ENST00000635744 85 ntBASIC-1.87□□□□□ -2.71
TNFP01375 MIR1244-2-201ENST00000636449 85 ntBASIC-1.87□□□□□ -2.71
TNFP01375 MIR1244-4-202ENST00000636813 85 ntBASIC-1.87□□□□□ -2.71
TNFP01375 RNU6-899P-201ENST00000363947 107 ntBASIC-1.88□□□□□ -2.71
TNFP01375 RNU6-728P-201ENST00000365375 104 ntBASIC-1.88□□□□□ -2.71
TNFP01375 RNY3P8-201ENST00000411366 126 ntBASIC-1.88□□□□□ -2.71
TNFP01375 RNU6-861P-201ENST00000516745 106 ntBASIC-1.88□□□□□ -2.71
TNFP01375 MIR23C-201ENST00000579846 100 ntBASIC-1.88□□□□□ -2.71
TNFP01375 AC013791.1-201ENST00000616619 62 ntBASIC-1.88□□□□□ -2.71
TNFP01375 AC092794.2-201ENST00000620933 563 ntBASIC-1.88□□□□□ -2.71
TNFP01375 MIR6739-201ENST00000622461 75 ntBASIC-1.88□□□□□ -2.71
TNFP01375 AC090617.10-201ENST00000624308 134 ntBASIC-1.88□□□□□ -2.71
TNFP01375 AL606534.2-204ENST00000635008 178 ntBASIC-1.88□□□□□ -2.71
TNFP01375 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.89□□□□□ -2.71
TNFP01375 RNU6-995P-201ENST00000391244 107 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.89□□□□□ -2.71
TNFP01375 MTND3P22-201ENST00000510932 243 ntBASIC-1.89□□□□□ -2.71
TNFP01375 RNU6-521P-201ENST00000516663 105 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.89□□□□□ -2.71
TNFP01375 AC119751.7-201ENST00000600494 245 ntBASIC-1.89□□□□□ -2.71
TNFP01375 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.9□□□□□ -2.71
TNFP01375 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.9□□□□□ -2.71
TNFP01375 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.9□□□□□ -2.71
TNFP01375 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.9□□□□□ -2.71
TNFP01375 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.9□□□□□ -2.71
TNFP01375 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.9□□□□□ -2.71
TNFP01375 AL021921.1-201ENST00000442774 93 ntBASIC-1.9□□□□□ -2.71
TNFP01375 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.9□□□□□ -2.71
TNFP01375 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.9□□□□□ -2.71
TNFP01375 RNU6-68P-201ENST00000516576 104 ntBASIC-1.9□□□□□ -2.71
TNFP01375 RNU6-656P-201ENST00000516785 107 ntBASIC-1.9□□□□□ -2.71
TNFP01375 AP003461.1-201ENST00000528866 78 ntBASIC-1.9□□□□□ -2.71
TNFP01375 MIR4659A-201ENST00000580269 81 ntBASIC-1.9□□□□□ -2.71
TNFP01375 MIR6509-201ENST00000614603 85 ntBASIC-1.9□□□□□ -2.71
TNFP01375 AC012531.4-201ENST00000616509 177 ntBASIC-1.9□□□□□ -2.71
TNFP01375 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.91□□□□□ -2.72
TNFP01375 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.91□□□□□ -2.72
TNFP01375 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.91□□□□□ -2.72
TNFP01375 SNORD78.2-201ENST00000391076 69 ntBASIC-1.91□□□□□ -2.72
TNFP01375 MTND3P2-201ENST00000438452 342 ntBASIC-1.91□□□□□ -2.72
TNFP01375 RNU6-453P-201ENST00000516819 85 ntBASIC-1.91□□□□□ -2.72
TNFP01375 RNU7-110P-201ENST00000516891 62 ntBASIC-1.91□□□□□ -2.72
TNFP01375 MIR1255B1-201ENST00000636325 63 ntBASIC-1.91□□□□□ -2.72
TNFP01375 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.92□□□□□ -2.72
TNFP01375 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.92□□□□□ -2.72
TNFP01375 RNU6-974P-201ENST00000384099 108 ntBASIC-1.92□□□□□ -2.72
TNFP01375 SNORA79-201ENST00000408376 140 ntBASIC-1.92□□□□□ -2.72
TNFP01375 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.92□□□□□ -2.72
TNFP01375 RNU6-764P-201ENST00000516396 105 ntBASIC-1.92□□□□□ -2.72
TNFP01375 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.92□□□□□ -2.72
TNFP01375 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.92□□□□□ -2.72
TNFP01375 MTND3P12-201ENST00000559068 328 ntBASIC-1.92□□□□□ -2.72
TNFP01375 MIR4509-3-201ENST00000578671 94 ntBASIC-1.92□□□□□ -2.72
TNFP01375 MIR3064-201ENST00000581130 66 ntBASIC-1.92□□□□□ -2.72
TNFP01375 MIR4509-2-201ENST00000583920 94 ntBASIC-1.92□□□□□ -2.72
TNFP01375 MIR4509-1-201ENST00000618224 94 ntBASIC-1.92□□□□□ -2.72
TNFP01375 AC022079.1-201ENST00000621546 602 ntBASIC-1.92□□□□□ -2.72
TNFP01375 AC025521.1-201ENST00000621624 286 ntBASIC-1.92□□□□□ -2.72
TNFP01375 TPTEP1-208ENST00000636884 213 ntBASIC-1.92□□□□□ -2.72
TNFP01375 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.93□□□□□ -2.72
TNFP01375 RNU6-645P-201ENST00000364649 106 ntBASIC-1.93□□□□□ -2.72
TNFP01375 RNU6-828P-201ENST00000364876 107 ntBASIC-1.93□□□□□ -2.72
TNFP01375 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.93□□□□□ -2.72
TNFP01375 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.93□□□□□ -2.72
TNFP01375 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.93□□□□□ -2.72
TNFP01375 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
TNFP01375 MIR548G-201ENST00000408442 89 ntBASIC-1.93□□□□□ -2.72
TNFP01375 RNU2-55P-201ENST00000411146 174 ntBASIC-1.93□□□□□ -2.72
TNFP01375 AC007485.1-201ENST00000616755 206 ntBASIC-1.93□□□□□ -2.72
TNFP01375 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.94□□□□□ -2.72
TNFP01375 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.94□□□□□ -2.72
TNFP01375 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.94□□□□□ -2.72
TNFP01375 RNA5SP292-201ENST00000390974 118 ntBASIC-1.94□□□□□ -2.72
TNFP01375 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 408.9 ms