Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SNORD41.1-201ENST00000391000 69 ntBASIC0.19□□□□□ -2.38
GPC4O75487 MIR1912-201ENST00000410389 80 ntBASIC0.19□□□□□ -2.38
GPC4O75487 MIR4679-2-201ENST00000578358 77 ntBASIC0.19□□□□□ -2.38
GPC4O75487 MIR3613-201ENST00000579844 87 ntBASIC0.19□□□□□ -2.38
GPC4O75487 AL670379.3-201ENST00000605040 251 ntBASIC0.19□□□□□ -2.38
GPC4O75487 RNU6-86P-201ENST00000606534 107 ntBASIC0.19□□□□□ -2.38
GPC4O75487 AL162376.1-201ENST00000624117 175 ntBASIC0.19□□□□□ -2.38
GPC4O75487 MIR330-201ENST00000362196 94 ntBASIC0.18□□□□□ -2.38
GPC4O75487 U8.6-201ENST00000364939 135 ntBASIC0.18□□□□□ -2.38
GPC4O75487 MIR7-2-201ENST00000384970 110 ntBASIC0.18□□□□□ -2.38
GPC4O75487 RNU6-243P-201ENST00000391140 107 ntBASIC0.18□□□□□ -2.38
GPC4O75487 AC109327.2-201ENST00000448339 378 ntBASIC0.18□□□□□ -2.38
GPC4O75487 NAMPTP3-201ENST00000569273 224 ntBASIC0.18□□□□□ -2.38
GPC4O75487 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
GPC4O75487 Y_RNA.173-201ENST00000363776 113 ntBASIC0.17□□□□□ -2.38
GPC4O75487 Y_RNA.323-201ENST00000365157 109 ntBASIC0.17□□□□□ -2.38
GPC4O75487 SNORA2A-201ENST00000383885 135 ntBASIC0.17□□□□□ -2.38
GPC4O75487 RNU6-1254P-201ENST00000391266 104 ntBASIC0.17□□□□□ -2.38
GPC4O75487 TMSB4XP3-201ENST00000445144 114 ntBASIC0.17□□□□□ -2.38
GPC4O75487 RNA5SP484-201ENST00000458857 111 ntBASIC0.17□□□□□ -2.38
GPC4O75487 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.17□□□□□ -2.38
GPC4O75487 MIR3920-201ENST00000581751 86 ntBASIC0.17□□□□□ -2.38
GPC4O75487 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
GPC4O75487 U6.95-201ENST00000636931 70 ntBASIC0.17□□□□□ -2.38
GPC4O75487 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
GPC4O75487 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
GPC4O75487 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
GPC4O75487 SNORA9.1-201ENST00000362412 131 ntBASIC0.16□□□□□ -2.38
GPC4O75487 RNU6-957P-201ENST00000363652 99 ntBASIC0.16□□□□□ -2.38
GPC4O75487 Y_RNA.163-201ENST00000363702 113 ntBASIC0.16□□□□□ -2.38
GPC4O75487 SNORD116-21-201ENST00000384507 92 ntBASIC0.16□□□□□ -2.38
GPC4O75487 MIR181B2-201ENST00000385004 89 ntBASIC0.16□□□□□ -2.38
GPC4O75487 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
GPC4O75487 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
GPC4O75487 RNU6-1265P-201ENST00000516342 103 ntBASIC0.16□□□□□ -2.38
GPC4O75487 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
GPC4O75487 AC141557.1-201ENST00000540982 400 ntBASIC0.16□□□□□ -2.38
GPC4O75487 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
GPC4O75487 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
GPC4O75487 TRDV1-202ENST00000621643 102 ntBASIC0.16□□□□□ -2.38
GPC4O75487 SNORD36A-201ENST00000362874 73 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNU6-832P-201ENST00000363319 107 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNA5SP325-201ENST00000363756 130 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNU6-1163P-201ENST00000364516 107 ntBASIC0.15□□□□□ -2.39
GPC4O75487 Y_RNA.353-201ENST00000365440 108 ntBASIC0.15□□□□□ -2.39
GPC4O75487 SNORA19.1-201ENST00000410656 129 ntBASIC0.15□□□□□ -2.39
GPC4O75487 snoU13.11-201ENST00000459219 104 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNU6-848P-201ENST00000515948 107 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNU6-617P-201ENST00000516147 107 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNU6-473P-201ENST00000516164 107 ntBASIC0.15□□□□□ -2.39
GPC4O75487 RNU6-1049P-201ENST00000516414 107 ntBASIC0.15□□□□□ -2.39
GPC4O75487 MIR5009-201ENST00000578736 100 ntBASIC0.15□□□□□ -2.39
GPC4O75487 MIR548Z-201ENST00000584743 97 ntBASIC0.15□□□□□ -2.39
GPC4O75487 AC096720.1-201ENST00000604441 183 ntBASIC0.15□□□□□ -2.39
GPC4O75487 MIR6129-201ENST00000616087 109 ntBASIC0.15□□□□□ -2.39
GPC4O75487 U6.100-201ENST00000636230 99 ntBASIC0.15□□□□□ -2.39
GPC4O75487 SNORD114-5-201ENST00000362928 70 ntBASIC0.14□□□□□ -2.39
GPC4O75487 RNU6-127P-201ENST00000390897 107 ntBASIC0.14□□□□□ -2.39
GPC4O75487 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
GPC4O75487 AC006210.1-201ENST00000424882 111 ntBASIC0.14□□□□□ -2.39
GPC4O75487 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.14□□□□□ -2.39
GPC4O75487 RNU6-795P-201ENST00000516323 103 ntBASIC0.14□□□□□ -2.39
GPC4O75487 MIR548AG2-201ENST00000581228 64 ntBASIC0.14□□□□□ -2.39
GPC4O75487 MIR8087-201ENST00000612745 78 ntBASIC0.14□□□□□ -2.39
GPC4O75487 AC025521.1-201ENST00000621624 286 ntBASIC0.14□□□□□ -2.39
GPC4O75487 Y_RNA.258-201ENST00000364613 105 ntBASIC0.13□□□□□ -2.39
GPC4O75487 RNA5SP128-201ENST00000365305 116 ntBASIC0.13□□□□□ -2.39
GPC4O75487 SNORA51.5-201ENST00000384126 131 ntBASIC0.13□□□□□ -2.39
GPC4O75487 SNORD110-201ENST00000408189 75 ntBASIC0.13□□□□□ -2.39
GPC4O75487 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.13□□□□□ -2.39
GPC4O75487 MIR4694-201ENST00000578534 80 ntBASIC0.13□□□□□ -2.39
GPC4O75487 MIR4473-201ENST00000583731 91 ntBASIC0.13□□□□□ -2.39
GPC4O75487 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
GPC4O75487 RNY3P2-201ENST00000362918 102 ntBASIC0.12□□□□□ -2.39
GPC4O75487 Y_RNA.78-201ENST00000362970 110 ntBASIC0.12□□□□□ -2.39
GPC4O75487 RNU6-81P-201ENST00000365608 104 ntBASIC0.12□□□□□ -2.39
GPC4O75487 Y_RNA.377-201ENST00000365644 108 ntBASIC0.12□□□□□ -2.39
GPC4O75487 Y_RNA.467-201ENST00000384297 102 ntBASIC0.12□□□□□ -2.39
GPC4O75487 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
GPC4O75487 AC008267.6-201ENST00000441664 139 ntBASIC0.12□□□□□ -2.39
GPC4O75487 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.12□□□□□ -2.39
GPC4O75487 RNA5SP330-201ENST00000517096 96 ntBASIC0.12□□□□□ -2.39
GPC4O75487 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
GPC4O75487 MIR501-201ENST00000390204 84 ntBASIC0.11□□□□□ -2.39
GPC4O75487 RNU6-287P-201ENST00000516230 98 ntBASIC0.11□□□□□ -2.39
GPC4O75487 MIR3910-1-201ENST00000580936 111 ntBASIC0.11□□□□□ -2.39
GPC4O75487 uc_338.28-201ENST00000612082 187 ntBASIC0.11□□□□□ -2.39
GPC4O75487 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
GPC4O75487 RNU6-1107P-201ENST00000364817 104 ntBASIC0.1□□□□□ -2.39
GPC4O75487 RNU6-1014P-201ENST00000383940 103 ntBASIC0.1□□□□□ -2.39
GPC4O75487 RNU6-880P-201ENST00000384526 107 ntBASIC0.1□□□□□ -2.39
GPC4O75487 Y_RNA.563-201ENST00000384707 108 ntBASIC0.1□□□□□ -2.39
GPC4O75487 MIR106A-201ENST00000384870 81 ntBASIC0.1□□□□□ -2.39
GPC4O75487 MIR1197-201ENST00000408818 88 ntBASIC0.1□□□□□ -2.39
GPC4O75487 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.1□□□□□ -2.39
GPC4O75487 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.1□□□□□ -2.39
GPC4O75487 SNORA42.1-201ENST00000363515 137 ntBASIC0.09□□□□□ -2.4
GPC4O75487 RNU6-22P-201ENST00000384355 107 ntBASIC0.09□□□□□ -2.4
GPC4O75487 MIR519E-201ENST00000385075 84 ntBASIC0.09□□□□□ -2.4
GPC4O75487 RNU6-1154P-201ENST00000391001 104 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms