Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.24□□□□□ -2.21
PRPF40AO75400 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 MIR1287-201ENST00000408492 90 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 MIR1276-201ENST00000408707 83 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 AC244098.3-201ENST00000424803 96 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 RNU7-85P-201ENST00000458851 63 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 SNORD4B-201ENST00000459083 72 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 RNA5SP102-201ENST00000516865 106 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
PRPF40AO75400 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
PRPF40AO75400 RNU4-45P-201ENST00000365469 141 ntBASIC1.22□□□□□ -2.21
PRPF40AO75400 IGLL4P-201ENST00000614590 133 ntBASIC1.22□□□□□ -2.21
PRPF40AO75400 MIR4679-1-201ENST00000637619 75 ntBASIC1.22□□□□□ -2.21
PRPF40AO75400 MIR450A2-201ENST00000385022 100 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 Y_RNA.593-201ENST00000410292 98 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 RNA5SP222-201ENST00000411039 105 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
PRPF40AO75400 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.21□□□□□ -2.22
PRPF40AO75400 MIR3678-201ENST00000578455 94 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
PRPF40AO75400 Y_RNA.620-201ENST00000411009 88 ntBASIC1.2□□□□□ -2.22
PRPF40AO75400 MIR6504-201ENST00000613520 61 ntBASIC1.2□□□□□ -2.22
PRPF40AO75400 RNY1P1-201ENST00000364372 112 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 SNORD73B-201ENST00000364394 72 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 MIR4639-201ENST00000584938 69 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
PRPF40AO75400 MIR18A-201ENST00000362310 71 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 RNU4-32P-201ENST00000363404 141 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 AL606490.4-201ENST00000423117 127 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 RNU7-104P-201ENST00000459398 79 ntBASIC1.18□□□□□ -2.22
PRPF40AO75400 RNU6-219P-201ENST00000364728 107 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 MIR548U-201ENST00000390728 81 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 RNU6-1265P-201ENST00000516342 103 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 RNU6-267P-201ENST00000516714 103 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 RNU6-762P-201ENST00000517107 102 ntBASIC1.17□□□□□ -2.22
PRPF40AO75400 MIR494-201ENST00000349529 81 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-633P-201ENST00000362612 103 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 SNORD18A-201ENST00000363753 72 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-811P-201ENST00000384069 107 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-675P-201ENST00000384236 104 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 MIR608-201ENST00000384820 100 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU6-75P-201ENST00000515944 104 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 RNU7-13P-201ENST00000516413 62 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 U6.100-201ENST00000636230 99 ntBASIC1.16□□□□□ -2.22
PRPF40AO75400 SNORD28-201ENST00000384706 75 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 MIR519C-201ENST00000385053 87 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 Y_RNA.596-201ENST00000410462 109 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.15□□□□□ -2.23
PRPF40AO75400 RNU7-161P-201ENST00000517289 62 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 AC244669.1-204ENST00000621564 178 ntBASIC1.15□□□□□ -2.23
PRPF40AO75400 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PRPF40AO75400 RNU6-509P-201ENST00000363519 107 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 RNA5SP403-201ENST00000363598 108 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 SNORA36.2-201ENST00000384004 127 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 SNORD101-201ENST00000384027 73 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 MIR548L-201ENST00000408303 86 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 MIR1236-201ENST00000408340 102 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.14□□□□□ -2.23
PRPF40AO75400 AC067863.3-201ENST00000624172 122 ntBASIC1.14□□□□□ -2.23
PRPF40AO75400 SNORD115-37-201ENST00000363768 82 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 Y_RNA.224-201ENST00000364308 111 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 SNORD114-22-201ENST00000365423 72 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 RNU6-820P-201ENST00000384273 107 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 SNORA26.2-201ENST00000390922 122 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 MIR1302-4-201ENST00000408701 150 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
PRPF40AO75400 MIRLET7F1-201ENST00000362202 87 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 Y_RNA.239-201ENST00000364444 113 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 SNORD115-44-201ENST00000365391 82 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 RN7SKP12-201ENST00000516275 143 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 AC104996.3-201ENST00000590718 94 ntBASIC1.12□□□□□ -2.23
PRPF40AO75400 Y_RNA.508-201ENST00000384502 114 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 Y_RNA.611-201ENST00000410682 108 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.11□□□□□ -2.23
PRPF40AO75400 RNA5SP47-201ENST00000517230 109 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 MIR3064-201ENST00000581130 66 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 AC062037.1-201ENST00000605302 128 ntBASIC1.11□□□□□ -2.23
PRPF40AO75400 RNU6-664P-201ENST00000362381 107 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 SNORD115-27-201ENST00000364430 82 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 RNU6-132P-201ENST00000383863 107 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 SCARNA16.5-201ENST00000517114 183 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
PRPF40AO75400 Y_RNA.73-201ENST00000362910 113 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 MIR518E-201ENST00000385252 88 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 RNU6-1057P-201ENST00000517162 102 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 MIR4696-201ENST00000581431 70 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 MIR548BB-201ENST00000626714 66 ntBASIC1.09□□□□□ -2.23
PRPF40AO75400 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
PRPF40AO75400 Y_RNA.491-201ENST00000384417 107 ntBASIC1.08□□□□□ -2.24
PRPF40AO75400 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PRPF40AO75400 RNY4P29-201ENST00000410801 97 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms