Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR4771-1-201ENST00000582617 74 ntBASIC1.78□□□□□ -2.12
SOX1O00570 MIR151B-201ENST00000584249 96 ntBASIC1.78□□□□□ -2.12
SOX1O00570 AL353770.2-201ENST00000620024 78 ntBASIC1.78□□□□□ -2.12
SOX1O00570 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.13
SOX1O00570 RNU6-161P-201ENST00000363051 106 ntBASIC1.77□□□□□ -2.13
SOX1O00570 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
SOX1O00570 MIR548J-201ENST00000408833 112 ntBASIC1.77□□□□□ -2.13
SOX1O00570 RNU7-156P-201ENST00000517214 74 ntBASIC1.77□□□□□ -2.13
SOX1O00570 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.77□□□□□ -2.13
SOX1O00570 MIR6788-201ENST00000618842 66 ntBASIC1.77□□□□□ -2.13
SOX1O00570 MIRLET7F1-201ENST00000362202 87 ntBASIC1.76□□□□□ -2.13
SOX1O00570 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.76□□□□□ -2.13
SOX1O00570 Y_RNA.697-201ENST00000516776 113 ntBASIC1.76□□□□□ -2.13
SOX1O00570 RNU6-902P-201ENST00000517212 91 ntBASIC1.76□□□□□ -2.13
SOX1O00570 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.76□□□□□ -2.13
SOX1O00570 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.76□□□□□ -2.13
SOX1O00570 Y_RNA.42-201ENST00000362660 108 ntBASIC1.75□□□□□ -2.13
SOX1O00570 Y_RNA.68-201ENST00000362881 102 ntBASIC1.75□□□□□ -2.13
SOX1O00570 SNORD114-27-201ENST00000363766 70 ntBASIC1.75□□□□□ -2.13
SOX1O00570 Y_RNA.264-201ENST00000364665 102 ntBASIC1.75□□□□□ -2.13
SOX1O00570 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
SOX1O00570 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
SOX1O00570 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SOX1O00570 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
SOX1O00570 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
SOX1O00570 RNU7-21P-201ENST00000459430 62 ntBASIC1.75□□□□□ -2.13
SOX1O00570 RNU6-448P-201ENST00000517052 107 ntBASIC1.75□□□□□ -2.13
SOX1O00570 AC138907.6-201ENST00000568401 126 ntBASIC1.75□□□□□ -2.13
SOX1O00570 AC138869.1-201ENST00000568623 124 ntBASIC1.75□□□□□ -2.13
SOX1O00570 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SOX1O00570 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
SOX1O00570 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.13
SOX1O00570 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SOX1O00570 SNORD77.2-201ENST00000391045 68 ntBASIC1.74□□□□□ -2.13
SOX1O00570 RNU6-1108P-201ENST00000516308 104 ntBASIC1.74□□□□□ -2.13
SOX1O00570 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
SOX1O00570 MIR4448-201ENST00000584360 86 ntBASIC1.74□□□□□ -2.13
SOX1O00570 TRDV1-202ENST00000621643 102 ntBASIC1.74□□□□□ -2.13
SOX1O00570 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SOX1O00570 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
SOX1O00570 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SOX1O00570 RNU6-364P-201ENST00000384387 107 ntBASIC1.73□□□□□ -2.13
SOX1O00570 Y_RNA.545-201ENST00000384652 105 ntBASIC1.73□□□□□ -2.13
SOX1O00570 Y_RNA.565-201ENST00000384719 101 ntBASIC1.73□□□□□ -2.13
SOX1O00570 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
SOX1O00570 AC015818.7-201ENST00000428754 109 ntBASIC1.73□□□□□ -2.13
SOX1O00570 AC097635.1-201ENST00000450678 155 ntBASIC1.73□□□□□ -2.13
SOX1O00570 AC023827.1-201ENST00000569247 97 ntBASIC1.73□□□□□ -2.13
SOX1O00570 MIR4676-201ENST00000583078 72 ntBASIC1.73□□□□□ -2.13
SOX1O00570 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.72□□□□□ -2.13
SOX1O00570 Y_RNA.239-201ENST00000364444 113 ntBASIC1.72□□□□□ -2.13
SOX1O00570 MIR938-201ENST00000401216 83 ntBASIC1.72□□□□□ -2.13
SOX1O00570 RNU7-90P-201ENST00000459216 62 ntBASIC1.72□□□□□ -2.13
SOX1O00570 RNU7-40P-201ENST00000516397 64 ntBASIC1.72□□□□□ -2.13
SOX1O00570 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
SOX1O00570 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SOX1O00570 RNU6-910P-201ENST00000390844 107 ntBASIC1.71□□□□□ -2.14
SOX1O00570 RN7SL793P-201ENST00000583259 296 ntBASIC1.71□□□□□ -2.14
SOX1O00570 AC027335.2-201ENST00000624030 375 ntBASIC1.71□□□□□ -2.14
SOX1O00570 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
SOX1O00570 RNU6-208P-201ENST00000362431 107 ntBASIC1.7□□□□□ -2.14
SOX1O00570 MIR599-201ENST00000385069 95 ntBASIC1.7□□□□□ -2.14
SOX1O00570 AL606490.4-201ENST00000423117 127 ntBASIC1.7□□□□□ -2.14
SOX1O00570 AC139453.2-201ENST00000487255 133 ntBASIC1.7□□□□□ -2.14
SOX1O00570 RNA5SP476-201ENST00000516613 103 ntBASIC1.7□□□□□ -2.14
SOX1O00570 MIR6078-201ENST00000611069 100 ntBASIC1.7□□□□□ -2.14
SOX1O00570 MIR6767-201ENST00000637302 66 ntBASIC1.7□□□□□ -2.14
SOX1O00570 RNU6-664P-201ENST00000362381 107 ntBASIC1.69□□□□□ -2.14
SOX1O00570 RNU6-535P-201ENST00000384722 107 ntBASIC1.69□□□□□ -2.14
SOX1O00570 SNORD79.1-201ENST00000516069 84 ntBASIC1.69□□□□□ -2.14
SOX1O00570 RNU6-807P-201ENST00000516805 107 ntBASIC1.69□□□□□ -2.14
SOX1O00570 MIR4696-201ENST00000581431 70 ntBASIC1.69□□□□□ -2.14
SOX1O00570 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
SOX1O00570 MIR1297-201ENST00000637311 77 ntBASIC1.69□□□□□ -2.14
SOX1O00570 RNY4P3-201ENST00000365254 95 ntBASIC1.68□□□□□ -2.14
SOX1O00570 SNORD101-201ENST00000384027 73 ntBASIC1.68□□□□□ -2.14
SOX1O00570 Y_RNA.433-201ENST00000384089 102 ntBASIC1.68□□□□□ -2.14
SOX1O00570 MIR520H-201ENST00000385126 88 ntBASIC1.68□□□□□ -2.14
SOX1O00570 RNU6-994P-201ENST00000410507 111 ntBASIC1.68□□□□□ -2.14
SOX1O00570 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.68□□□□□ -2.14
SOX1O00570 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
SOX1O00570 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
SOX1O00570 RNU6-1051P-201ENST00000365471 102 ntBASIC1.67□□□□□ -2.14
SOX1O00570 SNORD90-201ENST00000391145 111 ntBASIC1.67□□□□□ -2.14
SOX1O00570 SUMO2P12-201ENST00000405924 140 ntBASIC1.67□□□□□ -2.14
SOX1O00570 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.67□□□□□ -2.14
SOX1O00570 Y_RNA.596-201ENST00000410462 109 ntBASIC1.67□□□□□ -2.14
SOX1O00570 AL354695.1-201ENST00000427935 228 ntBASIC1.67□□□□□ -2.14
SOX1O00570 RNU7-102P-201ENST00000458948 62 ntBASIC1.67□□□□□ -2.14
SOX1O00570 RNU6-977P-201ENST00000516411 103 ntBASIC1.67□□□□□ -2.14
SOX1O00570 MIR4804-201ENST00000581683 73 ntBASIC1.67□□□□□ -2.14
SOX1O00570 MTRNR2L2-201ENST00000604882 87 ntBASIC1.67□□□□□ -2.14
SOX1O00570 RNU6-291P-201ENST00000384720 107 ntBASIC1.66□□□□□ -2.14
SOX1O00570 RNU7-56P-201ENST00000458744 62 ntBASIC1.66□□□□□ -2.14
SOX1O00570 SCARNA18B-201ENST00000458806 135 ntBASIC1.66□□□□□ -2.14
SOX1O00570 Y_RNA.681-201ENST00000516445 113 ntBASIC1.66□□□□□ -2.14
SOX1O00570 YWHAEP2-201ENST00000580066 112 ntBASIC1.66□□□□□ -2.14
SOX1O00570 YWHAEP3-201ENST00000582767 121 ntBASIC1.66□□□□□ -2.14
SOX1O00570 AC008608.1-201ENST00000603910 127 ntBASIC1.66□□□□□ -2.14
SOX1O00570 U6.100-201ENST00000636230 99 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 300.3 ms