Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
RFXAPO00287 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RFXAPO00287 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RFXAPO00287 MIR101-2-201ENST00000362195 79 ntBASIC1.63□□□□□ -2.15
RFXAPO00287 RNA5SP245-201ENST00000364239 121 ntBASIC1.63□□□□□ -2.15
RFXAPO00287 Y_RNA.371-201ENST00000365591 113 ntBASIC1.63□□□□□ -2.15
RFXAPO00287 RNU6-871P-201ENST00000516122 100 ntBASIC1.63□□□□□ -2.15
RFXAPO00287 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.63□□□□□ -2.15
RFXAPO00287 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RFXAPO00287 RNA5SP363-201ENST00000365072 115 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 SNORA8.1-201ENST00000384250 140 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 MIR18B-201ENST00000454574 71 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 YWHAEP2-201ENST00000580066 112 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 YWHAEP3-201ENST00000582767 121 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 MIR1297-201ENST00000637311 77 ntBASIC1.62□□□□□ -2.15
RFXAPO00287 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
RFXAPO00287 RNU5F-1-201ENST00000362507 117 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 Y_RNA.36-201ENST00000362602 112 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 RNU6-1260P-201ENST00000362944 107 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 Y_RNA.264-201ENST00000364665 102 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 RNA5SP212-201ENST00000391223 107 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 SNORD30.1-201ENST00000391309 70 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 MIR1257-201ENST00000408490 117 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 RNU6-1052P-201ENST00000411398 104 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 AC125388.1-201ENST00000459631 156 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 RNU6-719P-201ENST00000516671 104 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 MIR4299-201ENST00000577899 72 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
RFXAPO00287 RNU6-664P-201ENST00000362381 107 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 Y_RNA.42-201ENST00000362660 108 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 RNU6-824P-201ENST00000363724 104 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 SNORD114-27-201ENST00000363766 70 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RFXAPO00287 SNORD101-201ENST00000384027 73 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 SNORA24B-201ENST00000384176 131 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 RNU6-649P-201ENST00000384463 107 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 RNU6-291P-201ENST00000384720 107 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 MIR520E-201ENST00000384867 87 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 MIR519A1-201ENST00000385257 85 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 SNORA75.2-201ENST00000391138 150 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 SNORA75.3-201ENST00000391231 150 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 RNA5SP233-201ENST00000459153 113 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 AC048334.1-201ENST00000477975 159 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 MIR4771-2-201ENST00000577758 74 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 MIR4771-1-201ENST00000582617 74 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 MIR4713-201ENST00000582691 75 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.6□□□□□ -2.15
RFXAPO00287 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RFXAPO00287 RNU6-340P-201ENST00000364005 107 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 Y_RNA.330-201ENST00000365230 109 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 Y_RNA.363-201ENST00000365529 113 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 MIR942-201ENST00000401111 86 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 RPS29P1-201ENST00000465274 159 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.59□□□□□ -2.15
RFXAPO00287 MIR4287-201ENST00000579398 78 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 MIR548H5-201ENST00000580314 60 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 AL096840.1-201ENST00000603287 93 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 U6.111-201ENST00000636093 83 ntBASIC1.59□□□□□ -2.15
RFXAPO00287 Y_RNA.56-201ENST00000362798 112 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 Y_RNA.239-201ENST00000364444 113 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 MIR599-201ENST00000385069 95 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 MIR154-201ENST00000385243 84 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RFXAPO00287 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 RNU6-1265P-201ENST00000516342 103 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 RNU7-40P-201ENST00000516397 64 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 RNU7-156P-201ENST00000517214 74 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 AC036111.3-201ENST00000526389 112 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 MTRNR2L2-201ENST00000604882 87 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
RFXAPO00287 RNU6-800P-201ENST00000384473 103 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 SNORD45A-201ENST00000384512 84 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RFXAPO00287 MIR676-201ENST00000390702 67 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 RNU6-663P-201ENST00000391105 106 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 AC023827.1-201ENST00000569247 97 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 MIR3664-201ENST00000579074 99 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.57□□□□□ -2.16
RFXAPO00287 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.57□□□□□ -2.16
RFXAPO00287 Y_RNA.205-201ENST00000364128 113 ntBASIC1.56□□□□□ -2.16
RFXAPO00287 Y_RNA.258-201ENST00000364613 105 ntBASIC1.56□□□□□ -2.16
RFXAPO00287 RNU1-93P-201ENST00000364704 169 ntBASIC1.56□□□□□ -2.16
RFXAPO00287 RNU6-934P-201ENST00000365154 107 ntBASIC1.56□□□□□ -2.16
RFXAPO00287 MIR451A-201ENST00000385059 72 ntBASIC1.56□□□□□ -2.16
RFXAPO00287 AC097635.1-201ENST00000450678 155 ntBASIC1.56□□□□□ -2.16
RFXAPO00287 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RFXAPO00287 RNU6-369P-201ENST00000362515 102 ntBASIC1.55□□□□□ -2.16
RFXAPO00287 MIR125B2-201ENST00000385128 89 ntBASIC1.55□□□□□ -2.16
RFXAPO00287 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
RFXAPO00287 RPS27P16-201ENST00000425758 201 ntBASIC1.55□□□□□ -2.16
RFXAPO00287 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
RFXAPO00287 AC008608.1-201ENST00000603910 127 ntBASIC1.55□□□□□ -2.16
RFXAPO00287 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
RFXAPO00287 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms