Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
SHISA7A6NL88 TRAJ51-201ENST00000504127 63 ntBASIC0.36□□□□□ -2.35
SHISA7A6NL88 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
SHISA7A6NL88 RNU6-479P-201ENST00000516348 105 ntBASIC0.36□□□□□ -2.35
SHISA7A6NL88 MIR4694-201ENST00000578534 80 ntBASIC0.36□□□□□ -2.35
SHISA7A6NL88 Y_RNA.377-201ENST00000365644 108 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 RNU6-1056P-201ENST00000383996 107 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 RNU6-1201P-201ENST00000384227 107 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 Y_RNA.549-201ENST00000384657 102 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 RNU6-476P-201ENST00000384726 107 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 MIR329-2-201ENST00000385029 84 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 MIR519A1-201ENST00000385257 85 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 RNU6-1064P-201ENST00000410626 104 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 Y_RNA.809-201ENST00000516058 95 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 MIR5009-201ENST00000578736 100 ntBASIC0.35□□□□□ -2.35
SHISA7A6NL88 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
SHISA7A6NL88 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 RNU6-834P-201ENST00000362367 110 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 Y_RNA.10-201ENST00000362371 110 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 Y_RNA.57-201ENST00000362806 113 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 RNA5SP205-201ENST00000364653 136 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 Y_RNA.281-201ENST00000364774 94 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 U8.6-201ENST00000364939 135 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 RNU6-1144P-201ENST00000384247 104 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 MIR1265-201ENST00000408444 86 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.34□□□□□ -2.36
SHISA7A6NL88 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 Y_RNA.659-201ENST00000515994 113 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 MIR6759-201ENST00000638110 65 ntBASIC0.34□□□□□ -2.36
SHISA7A6NL88 RNY3P2-201ENST00000362918 102 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-1260P-201ENST00000362944 107 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 SNORA36.1-201ENST00000363424 132 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-1125P-201ENST00000363601 107 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 Y_RNA.221-201ENST00000364248 96 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU4-36P-201ENST00000364294 144 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-480P-201ENST00000384332 107 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-1081P-201ENST00000384537 107 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-243P-201ENST00000391140 107 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-1254P-201ENST00000391266 104 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU2-51P-201ENST00000410708 197 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 AL606753.1-201ENST00000427435 87 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU7-195P-201ENST00000458793 62 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU7-104P-201ENST00000459398 79 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-1006P-201ENST00000516998 103 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 AC141557.1-201ENST00000540982 400 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 MIR4636-201ENST00000582271 80 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 MIR6828-201ENST00000636181 60 ntBASIC0.33□□□□□ -2.36
SHISA7A6NL88 RNU6-832P-201ENST00000363319 107 ntBASIC0.32□□□□□ -2.36
SHISA7A6NL88 RNU2-59P-201ENST00000410482 191 ntBASIC0.32□□□□□ -2.36
SHISA7A6NL88 Y_RNA.35-201ENST00000362601 101 ntBASIC0.31□□□□□ -2.36
SHISA7A6NL88 SNORD45B-201ENST00000364617 72 ntBASIC0.31□□□□□ -2.36
SHISA7A6NL88 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
SHISA7A6NL88 AL353813.1-201ENST00000440700 253 ntBASIC0.31□□□□□ -2.36
SHISA7A6NL88 Y_RNA.163-201ENST00000363702 113 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 Y_RNA.173-201ENST00000363776 113 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 RNU6-1107P-201ENST00000364817 104 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 Y_RNA.323-201ENST00000365157 109 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 RNU6-1014P-201ENST00000383940 103 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 MIR516A2-201ENST00000384888 90 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 MIR516A1-201ENST00000385033 90 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 MIR1302-5-201ENST00000408164 150 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 RNU7-74P-201ENST00000459104 62 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 RNU7-13P-201ENST00000516413 62 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 MIR4439-201ENST00000583746 80 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 MIR7107-201ENST00000611489 80 ntBASIC0.3□□□□□ -2.36
SHISA7A6NL88 RNA5SP403-201ENST00000363598 108 ntBASIC0.29□□□□□ -2.36
SHISA7A6NL88 Y_RNA.247-201ENST00000364500 92 ntBASIC0.29□□□□□ -2.36
SHISA7A6NL88 SNORD113-1-201ENST00000365321 69 ntBASIC0.29□□□□□ -2.36
SHISA7A6NL88 RNU7-161P-201ENST00000517289 62 ntBASIC0.29□□□□□ -2.36
SHISA7A6NL88 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.29□□□□□ -2.36
SHISA7A6NL88 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
SHISA7A6NL88 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU6-1126P-201ENST00000384002 107 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU6-1113P-201ENST00000384348 107 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNA5SP299-201ENST00000391203 116 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU7-106P-201ENST00000459514 67 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU6-406P-201ENST00000516470 107 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 MIR548AI-201ENST00000579940 88 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.28□□□□□ -2.36
SHISA7A6NL88 RNU6-726P-201ENST00000364680 107 ntBASIC0.27□□□□□ -2.37
SHISA7A6NL88 Y_RNA.273-201ENST00000364703 102 ntBASIC0.27□□□□□ -2.37
SHISA7A6NL88 SNORD115-44-201ENST00000365391 82 ntBASIC0.27□□□□□ -2.37
SHISA7A6NL88 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
SHISA7A6NL88 Y_RNA.96-201ENST00000363092 109 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 RNU6-466P-201ENST00000391224 103 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 Y_RNA.601-201ENST00000410500 113 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 RNU6-473P-201ENST00000516164 107 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 RNU6-1049P-201ENST00000516414 107 ntBASIC0.26□□□□□ -2.37
SHISA7A6NL88 MIR6129-201ENST00000616087 109 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms