Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-776P-201ENST00000364403 104 ntBASIC1.37□□□□□ -2.19
SHISA3A0PJX4 RNU6-1022P-201ENST00000365049 104 ntBASIC1.37□□□□□ -2.19
SHISA3A0PJX4 RNY4P3-201ENST00000365254 95 ntBASIC1.37□□□□□ -2.19
SHISA3A0PJX4 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
SHISA3A0PJX4 uc_338.16-201ENST00000621804 95 ntBASIC1.37□□□□□ -2.19
SHISA3A0PJX4 RNU5F-1-201ENST00000362507 117 ntBASIC1.36□□□□□ -2.19
SHISA3A0PJX4 SNORD115-44-201ENST00000365391 82 ntBASIC1.36□□□□□ -2.19
SHISA3A0PJX4 SNORA25.15-201ENST00000516487 89 ntBASIC1.36□□□□□ -2.19
SHISA3A0PJX4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 RNU6-161P-201ENST00000363051 106 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 RNA5SP99-201ENST00000364020 114 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 RNU6-935P-201ENST00000410371 100 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 U7.7-201ENST00000459276 60 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 RNA5SP458-201ENST00000516188 119 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 SNORA31.14-201ENST00000516728 116 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 AC145423.2-201ENST00000610631 239 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 MIR8081-201ENST00000611533 95 ntBASIC1.35□□□□□ -2.19
SHISA3A0PJX4 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
SHISA3A0PJX4 MIR200A-201ENST00000384875 90 ntBASIC1.34□□□□□ -2.19
SHISA3A0PJX4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.34□□□□□ -2.19
SHISA3A0PJX4 RNU6-135P-201ENST00000516769 101 ntBASIC1.34□□□□□ -2.19
SHISA3A0PJX4 MIR502-201ENST00000606349 86 ntBASIC1.34□□□□□ -2.19
SHISA3A0PJX4 RNU6-208P-201ENST00000362431 107 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 MIR520H-201ENST00000385126 88 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.33□□□□□ -2.2
SHISA3A0PJX4 U7.4-201ENST00000614961 63 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.33□□□□□ -2.2
SHISA3A0PJX4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.32□□□□□ -2.2
SHISA3A0PJX4 RNU1-17P-201ENST00000363022 152 ntBASIC1.32□□□□□ -2.2
SHISA3A0PJX4 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
SHISA3A0PJX4 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
SHISA3A0PJX4 MIR1297-201ENST00000637311 77 ntBASIC1.32□□□□□ -2.2
SHISA3A0PJX4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SHISA3A0PJX4 RNA5SP190-201ENST00000365222 118 ntBASIC1.31□□□□□ -2.2
SHISA3A0PJX4 AC002350.1-201ENST00000490759 375 ntBASIC1.31□□□□□ -2.2
SHISA3A0PJX4 MIR4255-201ENST00000579351 72 ntBASIC1.31□□□□□ -2.2
SHISA3A0PJX4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
SHISA3A0PJX4 RNA5SP403-201ENST00000363598 108 ntBASIC1.3□□□□□ -2.2
SHISA3A0PJX4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.3□□□□□ -2.2
SHISA3A0PJX4 RNA5SP117-201ENST00000365294 118 ntBASIC1.3□□□□□ -2.2
SHISA3A0PJX4 SNORD105-201ENST00000386910 85 ntBASIC1.3□□□□□ -2.2
SHISA3A0PJX4 SNORD89-201ENST00000390981 114 ntBASIC1.3□□□□□ -2.2
SHISA3A0PJX4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.3□□□□□ -2.2
SHISA3A0PJX4 SNORD115-24-201ENST00000363528 82 ntBASIC1.29□□□□□ -2.2
SHISA3A0PJX4 SNORD90-201ENST00000391145 111 ntBASIC1.29□□□□□ -2.2
SHISA3A0PJX4 RNU7-13P-201ENST00000516413 62 ntBASIC1.29□□□□□ -2.2
SHISA3A0PJX4 RNU6-807P-201ENST00000516805 107 ntBASIC1.29□□□□□ -2.2
SHISA3A0PJX4 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
SHISA3A0PJX4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.29□□□□□ -2.2
SHISA3A0PJX4 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
SHISA3A0PJX4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.28□□□□□ -2.2
SHISA3A0PJX4 SNORA67.5-201ENST00000391036 107 ntBASIC1.28□□□□□ -2.2
SHISA3A0PJX4 U3.27-201ENST00000391237 200 ntBASIC1.28□□□□□ -2.2
SHISA3A0PJX4 SNORD13-201ENST00000459299 104 ntBASIC1.28□□□□□ -2.2
SHISA3A0PJX4 RNU6-303P-201ENST00000517091 106 ntBASIC1.28□□□□□ -2.2
SHISA3A0PJX4 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 MIR451A-201ENST00000385059 72 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 MIR942-201ENST00000401111 86 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 RNU6-287P-201ENST00000516230 98 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 YWHAEP2-201ENST00000580066 112 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 AC025627.3-201ENST00000582078 182 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 YWHAEP3-201ENST00000582767 121 ntBASIC1.27□□□□□ -2.21
SHISA3A0PJX4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SHISA3A0PJX4 RNU6-469P-201ENST00000516253 101 ntBASIC1.26□□□□□ -2.21
SHISA3A0PJX4 RNU7-161P-201ENST00000517289 62 ntBASIC1.26□□□□□ -2.21
SHISA3A0PJX4 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.26□□□□□ -2.21
SHISA3A0PJX4 Y_RNA.12-201ENST00000362393 112 ntBASIC1.25□□□□□ -2.21
SHISA3A0PJX4 MIR216B-201ENST00000390186 82 ntBASIC1.25□□□□□ -2.21
SHISA3A0PJX4 snoU13.17-201ENST00000458802 104 ntBASIC1.25□□□□□ -2.21
SHISA3A0PJX4 SNORD53B-201ENST00000577887 78 ntBASIC1.25□□□□□ -2.21
SHISA3A0PJX4 MIR4639-201ENST00000584938 69 ntBASIC1.25□□□□□ -2.21
SHISA3A0PJX4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.25□□□□□ -2.21
SHISA3A0PJX4 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 RNU6-1126P-201ENST00000384002 107 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 Y_RNA.545-201ENST00000384652 105 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 MIR573-201ENST00000384964 99 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 RNU2-59P-201ENST00000410482 191 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 AC073261.1-201ENST00000429409 121 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 AL603825.1-201ENST00000438481 80 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 SNORD124-201ENST00000459577 104 ntBASIC1.24□□□□□ -2.21
SHISA3A0PJX4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.24□□□□□ -2.21
SHISA3A0PJX4 SNORA24B-201ENST00000384176 131 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SHISA3A0PJX4 MIR889-201ENST00000401280 79 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 AC074348.1-201ENST00000426503 132 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 MIR2113-201ENST00000459007 91 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 RNU7-104P-201ENST00000459398 79 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 AC097510.1-201ENST00000510945 133 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 MIR3920-201ENST00000581751 86 ntBASIC1.23□□□□□ -2.21
SHISA3A0PJX4 MIR3140-201ENST00000583685 90 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms