Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 SNORA63.7-201ENST00000365579 123 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 MTATP6P21-201ENST00000440681 189 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 RNU6-719P-201ENST00000516671 104 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 AC113139.1-201ENST00000605049 239 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 MIR6874-201ENST00000635894 71 ntBASIC-2.4□□□□□ -2.79
TRAV13-1A0A0B4J241 SNORD114-3-201ENST00000364969 75 ntBASIC-2.41□□□□□ -2.8
TRAV13-1A0A0B4J241 FGF7P7-201ENST00000514120 227 ntBASIC-2.41□□□□□ -2.8
TRAV13-1A0A0B4J241 MIR4744-201ENST00000581563 82 ntBASIC-2.41□□□□□ -2.8
TRAV13-1A0A0B4J241 AC090574.1-201ENST00000623186 233 ntBASIC-2.41□□□□□ -2.8
TRAV13-1A0A0B4J241 MTND4LP32-201ENST00000636111 270 ntBASIC-2.41□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORD115-19-201ENST00000363098 82 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORD115-18-201ENST00000363293 82 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORD115-17-201ENST00000364612 82 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 RNY4P36-201ENST00000391116 96 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 AL353691.2-201ENST00000443795 59 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 AL365265.1-201ENST00000621045 234 ntBASIC-2.42□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 RNY4P6-201ENST00000363667 96 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORD115-22-201ENST00000364456 82 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6-643P-201ENST00000384018 107 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORD116-29-201ENST00000384516 83 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 FGF7P4-201ENST00000509595 295 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 RNY4P20-201ENST00000516678 93 ntBASIC-2.43□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORD38.1-201ENST00000363863 68 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 MIR1302-11-201ENST00000408051 138 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 MIR1302-9-201ENST00000408365 138 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 MIR1302-10-201ENST00000408734 138 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6-412P-201ENST00000516434 106 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 MIR1302-2-201ENST00000607096 138 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 AC002553.4-201ENST00000616896 331 ntBASIC-2.44□□□□□ -2.8
TRAV13-1A0A0B4J241 MIR507-201ENST00000385234 94 ntBASIC-2.45□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.45□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6-75P-201ENST00000515944 104 ntBASIC-2.45□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU7-6P-201ENST00000516845 62 ntBASIC-2.45□□□□□ -2.8
TRAV13-1A0A0B4J241 AC092794.1-201ENST00000612734 582 ntBASIC-2.45□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.46□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.559-201ENST00000384686 107 ntBASIC-2.46□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6-578P-201ENST00000390980 103 ntBASIC-2.46□□□□□ -2.8
TRAV13-1A0A0B4J241 AL078595.1-201ENST00000404458 226 ntBASIC-2.46□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.46□□□□□ -2.8
TRAV13-1A0A0B4J241 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.46□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 SNORA2.1-201ENST00000363089 137 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 AC113618.1-201ENST00000416747 285 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 FGF7P6-202ENST00000451282 293 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 U4.5-201ENST00000617137 123 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.47□□□□□ -2.8
TRAV13-1A0A0B4J241 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.48□□□□□ -2.81
TRAV13-1A0A0B4J241 MIR1255B2-201ENST00000408618 67 ntBASIC-2.48□□□□□ -2.81
TRAV13-1A0A0B4J241 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.48□□□□□ -2.81
TRAV13-1A0A0B4J241 RNU6-651P-201ENST00000411040 105 ntBASIC-2.48□□□□□ -2.81
TRAV13-1A0A0B4J241 RNU6-983P-201ENST00000516004 103 ntBASIC-2.48□□□□□ -2.81
TRAV13-1A0A0B4J241 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.48□□□□□ -2.81
TRAV13-1A0A0B4J241 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.49□□□□□ -2.81
TRAV13-1A0A0B4J241 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.49□□□□□ -2.81
TRAV13-1A0A0B4J241 MIR1277-201ENST00000408536 78 ntBASIC-2.49□□□□□ -2.81
TRAV13-1A0A0B4J241 MTND1P29-201ENST00000448112 647 ntBASIC-2.49□□□□□ -2.81
TRAV13-1A0A0B4J241 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.49□□□□□ -2.81
TRAV13-1A0A0B4J241 AL512310.12-203ENST00000640543 90 ntBASIC-2.49□□□□□ -2.81
TRAV13-1A0A0B4J241 MIR548H1-201ENST00000408610 102 ntBASIC-2.5□□□□□ -2.81
TRAV13-1A0A0B4J241 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.5□□□□□ -2.81
TRAV13-1A0A0B4J241 AC080013.6-201ENST00000606185 215 ntBASIC-2.5□□□□□ -2.81
TRAV13-1A0A0B4J241 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 MIR548A1-201ENST00000385041 97 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 RNU7-24P-201ENST00000458867 62 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 RNU7-152P-201ENST00000458982 64 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 RNU6-976P-201ENST00000516086 111 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.51□□□□□ -2.81
TRAV13-1A0A0B4J241 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.51□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 260.4 ms