Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNU6-203P-201ENST00000384038 104 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 RNU6-1241P-201ENST00000384536 107 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 RNU6-291P-201ENST00000384720 107 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 RNA5SP137-201ENST00000516833 135 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 MIR3064-201ENST00000581130 66 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
NOTCH3Q9UM47 RNU6-664P-201ENST00000362381 107 ntBASIC1.09□□□□□ -2.24
NOTCH3Q9UM47 RNY4P3-201ENST00000365254 95 ntBASIC1.09□□□□□ -2.24
NOTCH3Q9UM47 RNU6-571P-201ENST00000384128 107 ntBASIC1.09□□□□□ -2.24
NOTCH3Q9UM47 RNU6-205P-201ENST00000390858 107 ntBASIC1.09□□□□□ -2.24
NOTCH3Q9UM47 AC005908.1-201ENST00000468701 347 ntBASIC1.09□□□□□ -2.24
NOTCH3Q9UM47 MIR520E-201ENST00000384867 87 ntBASIC1.08□□□□□ -2.24
NOTCH3Q9UM47 MIR597-201ENST00000384968 97 ntBASIC1.08□□□□□ -2.24
NOTCH3Q9UM47 MIR320A-201ENST00000385302 82 ntBASIC1.08□□□□□ -2.24
NOTCH3Q9UM47 RNU6-807P-201ENST00000516805 107 ntBASIC1.08□□□□□ -2.24
NOTCH3Q9UM47 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.08□□□□□ -2.24
NOTCH3Q9UM47 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.08□□□□□ -2.24
NOTCH3Q9UM47 SNORD48-201ENST00000364953 64 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RNU6-466P-201ENST00000391224 103 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RPL30P7-201ENST00000479312 323 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 MIR4491-201ENST00000581087 68 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RNU4-58P-201ENST00000363192 141 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 MT-TF-201ENST00000387314 71 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 MIR1304-201ENST00000408243 91 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RNA5SP450-201ENST00000411206 102 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 AC244636.1-201ENST00000421152 228 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 AC099513.1-201ENST00000490423 301 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RNU6-1194P-201ENST00000516208 104 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RNU6-687P-201ENST00000516443 89 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 SNORA31.17-201ENST00000516953 127 ntBASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NOTCH3Q9UM47 RNU6-340P-201ENST00000364005 107 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 Y_RNA.239-201ENST00000364444 113 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 Y_RNA.283-201ENST00000364798 112 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 RNU6-716P-201ENST00000365621 103 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 RNU1-148P-201ENST00000384472 162 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 MIR653-201ENST00000385279 96 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 RNVU1-2-201ENST00000516326 135 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 Y_RNA.207-201ENST00000364142 106 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 SNORA8.1-201ENST00000384250 140 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 RNU6-296P-201ENST00000384608 107 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 snoU13.21-201ENST00000459368 105 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 SNORD92-201ENST00000585078 85 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 AL627230.6-201ENST00000611129 280 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.06□□□□□ -2.24
NOTCH3Q9UM47 RNU6-614P-201ENST00000384369 107 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 MIR563-201ENST00000385080 79 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 SNORD30.1-201ENST00000391309 70 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 RNA5SP501-201ENST00000410990 112 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 MIR2113-201ENST00000459007 91 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 snoU13.19-201ENST00000459148 104 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 TRAJ51-201ENST00000504127 63 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 RNU11-2P-201ENST00000516898 142 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 RNU6-1057P-201ENST00000517162 102 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 U6.59-201ENST00000615686 107 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 SNORA25.4-201ENST00000363666 124 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 SNORD45A-201ENST00000384512 84 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 MIR518A2-201ENST00000384966 87 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 AC005520.4-201ENST00000604337 90 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 AC069503.3-201ENST00000618674 145 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 uc_338.20-201ENST00000621563 178 ntBASIC1.05□□□□□ -2.24
NOTCH3Q9UM47 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 AL596028.1-201ENST00000326971 197 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 SNORA25.3-201ENST00000363205 127 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNA5SP48-201ENST00000363969 126 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNU6-1051P-201ENST00000365471 102 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNU6-800P-201ENST00000384473 103 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RPS27P16-201ENST00000425758 201 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 SUMO1P4-201ENST00000429430 302 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNU7-62P-201ENST00000458856 62 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 MIR514B-201ENST00000516774 80 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNA5SP481-201ENST00000516814 122 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 MIR4484-201ENST00000582855 83 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 MIR6788-201ENST00000618842 66 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 Y_RNA.119-201ENST00000363301 96 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 Y_RNA.258-201ENST00000364613 105 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNU6-1052P-201ENST00000411398 104 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 AC093423.1-201ENST00000440817 142 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNU6-719P-201ENST00000516671 104 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 GHRLOS.1-201ENST00000610995 70 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 MIR8053-201ENST00000613344 75 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 uc_338.6-201ENST00000613544 171 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 AC245884.12-201ENST00000615364 59 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 U6.100-201ENST00000636230 99 ntBASIC1.04□□□□□ -2.24
NOTCH3Q9UM47 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 RNU6-1260P-201ENST00000362944 107 ntBASIC1.03□□□□□ -2.24
NOTCH3Q9UM47 SNORD113.1-201ENST00000363280 73 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms