Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC092628.1-201ENST00000436250 252 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 MIR5089-201ENST00000580047 84 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 MIR3937-201ENST00000580135 106 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 MIR3140-201ENST00000583685 90 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 ZNF209P-201ENST00000593450 2304 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-1216P-201ENST00000362590 107 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 SNORD45.1-201ENST00000363181 77 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 SNORD115-22-201ENST00000364456 82 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-765P-201ENST00000516916 99 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 AC015688.6-201ENST00000577737 104 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 AC013244.2-201ENST00000603396 103 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 U6.100-201ENST00000636230 99 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 MIR934-201ENST00000401241 83 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 MIR1185-1-201ENST00000408598 86 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 snoU13.25-201ENST00000458945 104 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-752P-201ENST00000516376 102 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 AC019176.1-201ENST00000518519 225 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 MIR6082-201ENST00000613604 109 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 MIR103A2-201ENST00000362154 78 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 RNA5SP264-201ENST00000363115 107 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-824P-201ENST00000363724 104 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 SNORD1A-201ENST00000364968 72 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR2113-201ENST00000459007 91 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR4422-201ENST00000581938 83 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR7111-201ENST00000619751 72 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 SNORD113.1-201ENST00000363280 73 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 SNORD116-24-201ENST00000384549 92 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 U3.27-201ENST00000391237 200 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 MIR1257-201ENST00000408490 117 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 AC110620.1-201ENST00000416042 228 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 RNU7-185P-201ENST00000459215 60 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.697-201ENST00000516776 113 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 AC138907.6-201ENST00000568401 126 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 AC138869.1-201ENST00000568623 124 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 MIR6873-201ENST00000622788 63 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 MIR451A-201ENST00000385059 72 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 MIR337-201ENST00000362281 93 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.13-201ENST00000362403 112 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-654P-201ENST00000364373 107 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-1265P-201ENST00000516342 103 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 AC069503.3-201ENST00000618674 145 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 AC023934.1-201ENST00000574529 2389 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 MIR599-201ENST00000385069 95 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 RNU1-78P-201ENST00000391248 165 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-947P-201ENST00000516264 106 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-604P-201ENST00000390917 100 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1177P-201ENST00000391058 104 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-274P-201ENST00000459566 107 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-614P-201ENST00000384369 107 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 MIR1287-201ENST00000408492 90 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 RNA5SP95-201ENST00000410319 137 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1057P-201ENST00000517162 102 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 MIR4498-201ENST00000577599 66 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 U6.59-201ENST00000615686 107 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CUEDC1Q9NWM3 SNORA26.9-201ENST00000391322 122 ntBASIC2.13□□□□□ -2.07
CUEDC1Q9NWM3 MIR302D-201ENST00000362275 68 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1052P-201ENST00000411398 104 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 AC079150.2-201ENST00000443733 78 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-719P-201ENST00000516671 104 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 SNORD115-44-201ENST00000365391 82 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 SNORA40.6-201ENST00000391153 128 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 MIR4285-201ENST00000581001 85 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 MIR125B2-201ENST00000385128 89 ntBASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms