Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC013244.2-201ENST00000603396 103 ntBASIC1.23□□□□□ -2.21
TRIM55Q9BYV6 RNU6-90P-201ENST00000606352 106 ntBASIC1.23□□□□□ -2.21
TRIM55Q9BYV6 MALAT1.1-201ENST00000618249 95 ntBASIC1.23□□□□□ -2.21
TRIM55Q9BYV6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRIM55Q9BYV6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
TRIM55Q9BYV6 Y_RNA.290-201ENST00000364879 114 ntBASIC1.22□□□□□ -2.21
TRIM55Q9BYV6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.22□□□□□ -2.21
TRIM55Q9BYV6 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
TRIM55Q9BYV6 AC103810.7-201ENST00000607821 91 ntBASIC1.22□□□□□ -2.21
TRIM55Q9BYV6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.22□□□□□ -2.21
TRIM55Q9BYV6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 SNORD99-201ENST00000408612 74 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 AP003327.1-201ENST00000529684 127 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 AL078603.1-201ENST00000603824 313 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 MIR4679-1-201ENST00000637619 75 ntBASIC1.21□□□□□ -2.22
TRIM55Q9BYV6 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 SNORD38.2-201ENST00000384470 69 ntBASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.697-201ENST00000516776 113 ntBASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 RNU6-448P-201ENST00000517052 107 ntBASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 AC006254.2-201ENST00000603259 279 ntBASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 MIR2052-201ENST00000636055 55 ntBASIC1.2□□□□□ -2.22
TRIM55Q9BYV6 HSBP1P2-201ENST00000299671 229 ntBASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.190-201ENST00000363964 101 ntBASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.220-201ENST00000364244 109 ntBASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 RNU6-42P-201ENST00000384165 107 ntBASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 MIR573-201ENST00000384964 99 ntBASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
TRIM55Q9BYV6 RNU6-294P-201ENST00000364999 102 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 RNU6-813P-201ENST00000384691 107 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 MIR181B2-201ENST00000385004 89 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 RNA5SP220-201ENST00000516298 104 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.705-201ENST00000516862 110 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 RNU6-158P-201ENST00000517104 100 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 AL353765.1-201ENST00000605514 183 ntBASIC1.18□□□□□ -2.22
TRIM55Q9BYV6 MIR101-2-201ENST00000362195 79 ntBASIC1.17□□□□□ -2.22
TRIM55Q9BYV6 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.369-201ENST00000365568 117 ntBASIC1.17□□□□□ -2.22
TRIM55Q9BYV6 RNU6-887P-201ENST00000410660 100 ntBASIC1.17□□□□□ -2.22
TRIM55Q9BYV6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.16□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.16□□□□□ -2.22
TRIM55Q9BYV6 Y_RNA.536-201ENST00000384621 113 ntBASIC1.16□□□□□ -2.22
TRIM55Q9BYV6 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
TRIM55Q9BYV6 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
TRIM55Q9BYV6 AC025521.1-201ENST00000621624 286 ntBASIC1.16□□□□□ -2.22
TRIM55Q9BYV6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
TRIM55Q9BYV6 RNU6-1134P-201ENST00000365156 101 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 RNU6-291P-201ENST00000384720 107 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 SNORD100-201ENST00000408573 76 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 AC244098.3-201ENST00000424803 96 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 SNRPGP12-201ENST00000449481 213 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 RNU6-844P-201ENST00000517175 102 ntBASIC1.15□□□□□ -2.23
TRIM55Q9BYV6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.14□□□□□ -2.23
TRIM55Q9BYV6 RNU6-535P-201ENST00000384722 107 ntBASIC1.14□□□□□ -2.23
TRIM55Q9BYV6 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
TRIM55Q9BYV6 Y_RNA.56-201ENST00000362798 112 ntBASIC1.13□□□□□ -2.23
TRIM55Q9BYV6 RNU6-972P-201ENST00000391208 107 ntBASIC1.13□□□□□ -2.23
TRIM55Q9BYV6 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
TRIM55Q9BYV6 AL513043.2-201ENST00000573941 143 ntBASIC1.13□□□□□ -2.23
TRIM55Q9BYV6 MIR3612-201ENST00000579753 87 ntBASIC1.13□□□□□ -2.23
TRIM55Q9BYV6 SNORD58A-201ENST00000383875 65 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 RNU6-571P-201ENST00000384128 107 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 MIR516A2-201ENST00000384888 90 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 MIR516A1-201ENST00000385033 90 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 ACA64.5-201ENST00000516207 127 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 RNU6-762P-201ENST00000517107 102 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 AC026421.1-201ENST00000519101 163 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 MIR548H5-201ENST00000580314 60 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 MIR4439-201ENST00000583746 80 ntBASIC1.12□□□□□ -2.23
TRIM55Q9BYV6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRIM55Q9BYV6 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
TRIM55Q9BYV6 AC022709.1-201ENST00000615967 87 ntBASIC1.11□□□□□ -2.23
TRIM55Q9BYV6 uc_338.16-201ENST00000621804 95 ntBASIC1.11□□□□□ -2.23
TRIM55Q9BYV6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 RNU6-1125P-201ENST00000363601 107 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 SNORD73B-201ENST00000364394 72 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 RNA5SP117-201ENST00000365294 118 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 RNU6-480P-201ENST00000384332 107 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 RNU7-106P-201ENST00000459514 67 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 SNORA31.14-201ENST00000516728 116 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 RNU7-10P-201ENST00000607194 63 ntBASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM55Q9BYV6 Y_RNA.96-201ENST00000363092 109 ntBASIC1.09□□□□□ -2.23
TRIM55Q9BYV6 Y_RNA.609-201ENST00000410669 89 ntBASIC1.09□□□□□ -2.23
TRIM55Q9BYV6 TRAJ51-201ENST00000504127 63 ntBASIC1.09□□□□□ -2.23
TRIM55Q9BYV6 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
TRIM55Q9BYV6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 MIR494-201ENST00000349529 81 ntBASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 RNY1P4-201ENST00000384595 115 ntBASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 MIR7-2-201ENST00000384970 110 ntBASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
TRIM55Q9BYV6 RNU6-267P-201ENST00000516714 103 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms