Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
YIPF4Q9BSR8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 SNORA25.9-201ENST00000365087 128 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 RNU6-53P-201ENST00000365367 106 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 SNORD78.1-201ENST00000390866 65 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 Y_RNA.611-201ENST00000410682 108 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 AC002429.1-201ENST00000437672 148 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 Y_RNA.648-201ENST00000459455 110 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 RNU7-171P-201ENST00000459581 62 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 RNU6-1194P-201ENST00000516208 104 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 AP003327.1-201ENST00000529684 127 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 AC008608.1-201ENST00000603910 127 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
YIPF4Q9BSR8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
YIPF4Q9BSR8 RNU1-124P-201ENST00000363861 145 ntBASIC1.41□□□□□ -2.18
YIPF4Q9BSR8 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
YIPF4Q9BSR8 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
YIPF4Q9BSR8 RNU6-765P-201ENST00000516916 99 ntBASIC1.41□□□□□ -2.18
YIPF4Q9BSR8 RNU6-1124P-201ENST00000384169 107 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 RNU6-524P-201ENST00000384270 107 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.536-201ENST00000384621 113 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 RNU6-519P-201ENST00000410590 108 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 RNA5SP225-201ENST00000410874 135 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 RNU6-75P-201ENST00000515944 104 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 RNA5SP404-201ENST00000517118 132 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 RNU7-156P-201ENST00000517214 74 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 MIR4804-201ENST00000581683 73 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 SNORD92-201ENST00000585078 85 ntBASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
YIPF4Q9BSR8 MIR499A-201ENST00000384903 122 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 AC092628.1-201ENST00000436250 252 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 RNU7-195P-201ENST00000458793 62 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 RNU7-153P-201ENST00000516455 62 ntBASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.39□□□□□ -2.19
YIPF4Q9BSR8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 RNA5SP245-201ENST00000364239 121 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 RNU6-1254P-201ENST00000391266 104 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 AL606490.4-201ENST00000423117 127 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 RNU7-102P-201ENST00000458948 62 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 RNA5SP395-201ENST00000516567 118 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 RNU6-448P-201ENST00000517052 107 ntBASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.38□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.283-201ENST00000364798 112 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 RNU6-242P-201ENST00000384359 107 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 RNU6-291P-201ENST00000384720 107 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 MIR200A-201ENST00000384875 90 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 RNU6-994P-201ENST00000410507 111 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 MIR4666B-201ENST00000578142 81 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
YIPF4Q9BSR8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 MIR101-2-201ENST00000362195 79 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.56-201ENST00000362798 112 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 RNU6-957P-201ENST00000363652 99 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 SNORA7.1-201ENST00000363750 139 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.313-201ENST00000365095 103 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 MIR519A1-201ENST00000385257 85 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 RNU7-56P-201ENST00000458744 62 ntBASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
YIPF4Q9BSR8 RNU4-32P-201ENST00000363404 141 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 RNU6-132P-201ENST00000383863 107 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 MIR519C-201ENST00000385053 87 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 RNU6-243P-201ENST00000391140 107 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 MIR938-201ENST00000401216 83 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 MIR1255A-201ENST00000408338 113 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.697-201ENST00000516776 113 ntBASIC1.35□□□□□ -2.19
YIPF4Q9BSR8 MIR635-201ENST00000384830 98 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 RNA5SP292-201ENST00000390974 118 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 MIR1827-201ENST00000408549 66 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 Y_RNA.685-201ENST00000516532 108 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 MIR548H5-201ENST00000580314 60 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 MIR3202-2-201ENST00000635980 79 ntBASIC1.34□□□□□ -2.19
YIPF4Q9BSR8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
YIPF4Q9BSR8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 Y_RNA.426-201ENST00000384068 113 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 Y_RNA.437-201ENST00000384113 113 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 RNU6-364P-201ENST00000384387 107 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 RMST_2.1-201ENST00000617263 136 ntBASIC1.33□□□□□ -2.2
YIPF4Q9BSR8 RNU6-1260P-201ENST00000362944 107 ntBASIC1.32□□□□□ -2.2
YIPF4Q9BSR8 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
YIPF4Q9BSR8 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms