Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MIR942-201ENST00000401111 86 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 SNRPGP12-201ENST00000449481 213 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 MIR548Z-201ENST00000584743 97 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 AL136317.1-201ENST00000612653 226 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
PKP4Q99569 Y_RNA.118-201ENST00000363300 101 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 Y_RNA.467-201ENST00000384297 102 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 RNU7-56P-201ENST00000458744 62 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 RNU7-61P-201ENST00000515897 61 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 RNU6-1110P-201ENST00000516462 101 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 Y_RNA.705-201ENST00000516862 110 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 RNU6-86P-201ENST00000606534 107 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
PKP4Q99569 MIR101-2-201ENST00000362195 79 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-1298P-201ENST00000362456 101 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-1125P-201ENST00000363601 107 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-1244P-201ENST00000363614 108 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-480P-201ENST00000384332 107 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-644P-201ENST00000391155 98 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-972P-201ENST00000391208 107 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 BX276092.1-201ENST00000427368 251 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU7-102P-201ENST00000458948 62 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNU6-850P-201ENST00000516934 103 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 RNA5SP170-201ENST00000517150 101 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
PKP4Q99569 MIR520F-201ENST00000384824 87 ntBASIC0.84□□□□□ -2.27
PKP4Q99569 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.27
PKP4Q99569 RNU6-887P-201ENST00000410660 100 ntBASIC0.84□□□□□ -2.27
PKP4Q99569 AP003327.1-201ENST00000529684 127 ntBASIC0.84□□□□□ -2.27
PKP4Q99569 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.84□□□□□ -2.27
PKP4Q99569 RMST_2.1-201ENST00000617263 136 ntBASIC0.84□□□□□ -2.27
PKP4Q99569 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 Y_RNA.342-201ENST00000365352 113 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 MIR520E-201ENST00000384867 87 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 SNORD100-201ENST00000408573 76 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 RNY4P30-201ENST00000410216 95 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 Y_RNA.697-201ENST00000516776 113 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 MIR548H5-201ENST00000580314 60 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 MIR151B-201ENST00000584249 96 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 RNU7-10P-201ENST00000607194 63 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 AC103810.7-201ENST00000607821 91 ntBASIC0.83□□□□□ -2.28
PKP4Q99569 Y_RNA.56-201ENST00000362798 112 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 Y_RNA.57-201ENST00000362806 113 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 RPS29P1-201ENST00000465274 159 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 AC008608.1-201ENST00000603910 127 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 U7.3-201ENST00000616123 62 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 MALAT1.1-201ENST00000618249 95 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.82□□□□□ -2.28
PKP4Q99569 Y_RNA.220-201ENST00000364244 109 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 Y_RNA.536-201ENST00000384621 113 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 MIR635-201ENST00000384830 98 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 MIR181B2-201ENST00000385004 89 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 MIR520H-201ENST00000385126 88 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 SNORD105-201ENST00000386910 85 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
PKP4Q99569 RNU6-448P-201ENST00000517052 107 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
PKP4Q99569 SNORD116-10-201ENST00000363791 102 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 Y_RNA.290-201ENST00000364879 114 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 MIR488-201ENST00000365739 83 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 SNORD58A-201ENST00000383875 65 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 RNU6-291P-201ENST00000384720 107 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 RNU6-535P-201ENST00000384722 107 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 MIR5582-201ENST00000579697 68 ntBASIC0.8□□□□□ -2.28
PKP4Q99569 Y_RNA.43-201ENST00000362670 111 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 RNU6-1131P-201ENST00000364955 107 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 Y_RNA.369-201ENST00000365568 117 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 SNORD63B-201ENST00000411005 70 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 AC092628.1-201ENST00000436250 252 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 RNU6-162P-201ENST00000516228 103 ntBASIC0.79□□□□□ -2.28
PKP4Q99569 MIR516A2-201ENST00000384888 90 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 MIR516A1-201ENST00000385033 90 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 MIR519A1-201ENST00000385257 85 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 RNU6-1254P-201ENST00000391266 104 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 TRAJ51-201ENST00000504127 63 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 AC138869.1-201ENST00000568623 124 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 AL513043.2-201ENST00000573941 143 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 AC025521.1-201ENST00000621624 286 ntBASIC0.78□□□□□ -2.28
PKP4Q99569 RNU6-1255P-201ENST00000363434 112 ntBASIC0.77□□□□□ -2.29
PKP4Q99569 Y_RNA.174-201ENST00000363781 105 ntBASIC0.77□□□□□ -2.29
PKP4Q99569 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
PKP4Q99569 RNU6-243P-201ENST00000391140 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms