Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 Y_RNA.697-201ENST00000516776 113 ntBASIC2.5□□□□□ -2.01
TRIM47Q96LD4 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 Y_RNA.56-201ENST00000362798 112 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 RNU1-36P-201ENST00000365130 165 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 AC097635.1-201ENST00000450678 155 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 RPL30P7-201ENST00000479312 323 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 MIR3192-201ENST00000584920 77 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 AL078603.1-201ENST00000603824 313 ntBASIC2.49□□□□□ -2.01
TRIM47Q96LD4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRIM47Q96LD4 MIR583-201ENST00000384846 75 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 RNA5SP465-201ENST00000391195 109 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 RNU6-122P-201ENST00000516818 107 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 AC015688.6-201ENST00000577737 104 ntBASIC2.48□□□□□ -2.01
TRIM47Q96LD4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRIM47Q96LD4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM47Q96LD4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM47Q96LD4 RNU1-148P-201ENST00000384472 162 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 MT-TN-201ENST00000387400 73 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 RNA5SP299-201ENST00000391203 116 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 RNA5SP501-201ENST00000410990 112 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 MIR2115-201ENST00000516657 100 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
TRIM47Q96LD4 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 Y_RNA.379-201ENST00000365653 102 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 AC108667.1-201ENST00000428618 249 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 RNU6-1265P-201ENST00000516342 103 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRIM47Q96LD4 ZNF355P-201ENST00000427301 3216 ntBASIC2.46□□□□□ -2.02
TRIM47Q96LD4 RNU6-1312P-201ENST00000362425 108 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 MIR599-201ENST00000385069 95 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TRIM47Q96LD4 SNORA17.3-201ENST00000391159 129 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 U3.27-201ENST00000391237 200 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AC104435.1-201ENST00000483483 166 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AC103810.8-201ENST00000607347 118 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 AC073869.9-201ENST00000641610 120 ntBASIC2.45□□□□□ -2.02
TRIM47Q96LD4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM47Q96LD4 RNU6-203P-201ENST00000384038 104 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 MIR518A2-201ENST00000384966 87 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 SNORD75.2-201ENST00000408784 58 ntBASIC2.44□□□□□ -2.02
TRIM47Q96LD4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TRIM47Q96LD4 RNU6-645P-201ENST00000364649 106 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 RNU6-1039P-201ENST00000383931 107 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 SNORD41-201ENST00000386967 70 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 RN7SL274P-201ENST00000492268 272 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 snoU13.31-201ENST00000607291 104 ntBASIC2.43□□□□□ -2.02
TRIM47Q96LD4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
TRIM47Q96LD4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM47Q96LD4 Y_RNA.13-201ENST00000362403 112 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR203A-201ENST00000384836 110 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM47Q96LD4 RNA5SP182-201ENST00000516064 82 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR6082-201ENST00000613604 109 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 MIR6509-201ENST00000614603 85 ntBASIC2.42□□□□□ -2.02
TRIM47Q96LD4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TRIM47Q96LD4 SNORA75.1-201ENST00000391130 148 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 MIR18B-201ENST00000454574 71 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 RNU6-92P-201ENST00000605893 104 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 MIR6516-201ENST00000630554 81 ntBASIC2.41□□□□□ -2.02
TRIM47Q96LD4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TRIM47Q96LD4 MIR377-201ENST00000362145 69 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 SNORA48.3-201ENST00000391081 134 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 RNA5SP270-201ENST00000411361 118 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 AC004965.1-201ENST00000413033 213 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 RNU6-922P-201ENST00000516753 99 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.4□□□□□ -2.03
TRIM47Q96LD4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM47Q96LD4 RNU6-753P-201ENST00000363926 107 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 RNA5SP95-201ENST00000410319 137 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 RNU6-287P-201ENST00000516230 98 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 AC138907.6-201ENST00000568401 126 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 AC138869.1-201ENST00000568623 124 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 NAMPTP3-201ENST00000569273 224 ntBASIC2.39□□□□□ -2.03
TRIM47Q96LD4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
TRIM47Q96LD4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
TRIM47Q96LD4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM47Q96LD4 MIR378A-201ENST00000362177 66 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 SNORD60.1-201ENST00000362451 73 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 MIR194-1-201ENST00000384892 85 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 RNU6-360P-201ENST00000390944 104 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 RNU7-24P-201ENST00000458867 62 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 SNORA31.17-201ENST00000516953 127 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
TRIM47Q96LD4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM47Q96LD4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM47Q96LD4 RNA5SP215-201ENST00000363440 122 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 RNA5SP259-201ENST00000365541 109 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 RNA5SP100-201ENST00000410903 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 RNA5SP59-201ENST00000410922 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 snoU13.25-201ENST00000458945 104 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms