Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 Y_RNA.73-201ENST00000362910 113 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 RNU6-957P-201ENST00000363652 99 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 RNA5SP117-201ENST00000365294 118 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 RNU6-1152P-201ENST00000384576 107 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 MIR6845-201ENST00000613182 61 ntBASIC1.6□□□□□ -2.15
CALR3Q96L12 RNU6-497P-201ENST00000365316 104 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 RNU6-524P-201ENST00000384270 107 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 MIR519C-201ENST00000385053 87 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 RNA5SP255-201ENST00000516370 107 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
CALR3Q96L12 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
CALR3Q96L12 TRDV1-202ENST00000621643 102 ntBASIC1.58□□□□□ -2.16
CALR3Q96L12 MIR548BB-201ENST00000626714 66 ntBASIC1.58□□□□□ -2.16
CALR3Q96L12 RNU4-32P-201ENST00000363404 141 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 SNORD115-27-201ENST00000364430 82 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 RNA5SP173-201ENST00000364857 136 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 RNU6-242P-201ENST00000384359 107 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 MIR1236-201ENST00000408340 102 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 Y_RNA.611-201ENST00000410682 108 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 RNU6-75P-201ENST00000515944 104 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 MIR5588-201ENST00000581890 63 ntBASIC1.57□□□□□ -2.16
CALR3Q96L12 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
CALR3Q96L12 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CALR3Q96L12 RNU6-1335P-201ENST00000365426 107 ntBASIC1.55□□□□□ -2.16
CALR3Q96L12 RNU6-979P-201ENST00000383896 107 ntBASIC1.55□□□□□ -2.16
CALR3Q96L12 MIR573-201ENST00000384964 99 ntBASIC1.55□□□□□ -2.16
CALR3Q96L12 RPL23AP94-201ENST00000512518 302 ntBASIC1.55□□□□□ -2.16
CALR3Q96L12 Y_RNA.426-201ENST00000384068 113 ntBASIC1.54□□□□□ -2.16
CALR3Q96L12 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
CALR3Q96L12 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.16
CALR3Q96L12 SNORD115-37-201ENST00000363768 82 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 Y_RNA.221-201ENST00000364248 96 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 RNU6-811P-201ENST00000384069 107 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 RNU6-592P-201ENST00000411333 103 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 AL606490.4-201ENST00000423117 127 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 RNU6-135P-201ENST00000516769 101 ntBASIC1.53□□□□□ -2.16
CALR3Q96L12 RNU6-939P-201ENST00000384634 107 ntBASIC1.52□□□□□ -2.17
CALR3Q96L12 MIR548U-201ENST00000390728 81 ntBASIC1.52□□□□□ -2.17
CALR3Q96L12 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
CALR3Q96L12 RNU6-469P-201ENST00000516253 101 ntBASIC1.52□□□□□ -2.17
CALR3Q96L12 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
CALR3Q96L12 RNU6-1276P-201ENST00000365372 104 ntBASIC1.51□□□□□ -2.17
CALR3Q96L12 Y_RNA.508-201ENST00000384502 114 ntBASIC1.51□□□□□ -2.17
CALR3Q96L12 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
CALR3Q96L12 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CALR3Q96L12 RNU6-1265P-201ENST00000516342 103 ntBASIC1.51□□□□□ -2.17
CALR3Q96L12 SNORD115-24-201ENST00000363528 82 ntBASIC1.5□□□□□ -2.17
CALR3Q96L12 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CALR3Q96L12 RNU6-573P-201ENST00000383938 106 ntBASIC1.5□□□□□ -2.17
CALR3Q96L12 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CALR3Q96L12 AC093729.1-201ENST00000513074 128 ntBASIC1.5□□□□□ -2.17
CALR3Q96L12 MIR3612-201ENST00000579753 87 ntBASIC1.5□□□□□ -2.17
CALR3Q96L12 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.5□□□□□ -2.17
CALR3Q96L12 AC006160.2-201ENST00000637708 154 ntBASIC1.5□□□□□ -2.17
CALR3Q96L12 MIR644A-201ENST00000385262 94 ntBASIC1.49□□□□□ -2.17
CALR3Q96L12 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
CALR3Q96L12 RNU7-171P-201ENST00000459581 62 ntBASIC1.49□□□□□ -2.17
CALR3Q96L12 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.49□□□□□ -2.17
CALR3Q96L12 MIR3064-201ENST00000581130 66 ntBASIC1.49□□□□□ -2.17
CALR3Q96L12 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CALR3Q96L12 RNU6-132P-201ENST00000383863 107 ntBASIC1.48□□□□□ -2.17
CALR3Q96L12 MIR518E-201ENST00000385252 88 ntBASIC1.48□□□□□ -2.17
CALR3Q96L12 SNORD99-201ENST00000408612 74 ntBASIC1.48□□□□□ -2.17
CALR3Q96L12 Y_RNA.596-201ENST00000410462 109 ntBASIC1.48□□□□□ -2.17
CALR3Q96L12 AC104996.3-201ENST00000590718 94 ntBASIC1.48□□□□□ -2.17
CALR3Q96L12 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.48□□□□□ -2.17
CALR3Q96L12 MIRLET7F1-201ENST00000362202 87 ntBASIC1.47□□□□□ -2.17
CALR3Q96L12 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.47□□□□□ -2.17
CALR3Q96L12 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
CALR3Q96L12 U6.100-201ENST00000636230 99 ntBASIC1.47□□□□□ -2.17
CALR3Q96L12 RNU6-664P-201ENST00000362381 107 ntBASIC1.46□□□□□ -2.18
CALR3Q96L12 RNA5SP403-201ENST00000363598 108 ntBASIC1.46□□□□□ -2.18
CALR3Q96L12 SNORD101-201ENST00000384027 73 ntBASIC1.46□□□□□ -2.18
CALR3Q96L12 RNU7-153P-201ENST00000516455 62 ntBASIC1.46□□□□□ -2.18
CALR3Q96L12 AC011195.1-201ENST00000578177 177 ntBASIC1.46□□□□□ -2.18
CALR3Q96L12 MTRNR2L2-201ENST00000604882 87 ntBASIC1.46□□□□□ -2.18
CALR3Q96L12 Y_RNA.239-201ENST00000364444 113 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 Y_RNA.491-201ENST00000384417 107 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 RNA5SP292-201ENST00000390974 118 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 Y_RNA.607-201ENST00000410597 98 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 MIR4661-201ENST00000582720 75 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 MIR4639-201ENST00000584938 69 ntBASIC1.45□□□□□ -2.18
CALR3Q96L12 Y_RNA.219-201ENST00000364232 113 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 snoU13.15-201ENST00000459407 104 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 SNORA18.5-201ENST00000516616 101 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 MIR4796-201ENST00000580742 81 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 MIR4696-201ENST00000581431 70 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 MIR7843-201ENST00000622274 79 ntBASIC1.44□□□□□ -2.18
CALR3Q96L12 SNORD115-44-201ENST00000365391 82 ntBASIC1.43□□□□□ -2.18
CALR3Q96L12 AC244098.3-201ENST00000424803 96 ntBASIC1.43□□□□□ -2.18
CALR3Q96L12 RNU7-161P-201ENST00000517289 62 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms