Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.73□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.342-201ENST00000365352 113 ntBASIC0.73□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.73□□□□□ -2.29
CDK5RAP3Q96JB5 SNORD63B-201ENST00000411005 70 ntBASIC0.73□□□□□ -2.29
CDK5RAP3Q96JB5 RNA5SP94-201ENST00000516917 108 ntBASIC0.73□□□□□ -2.29
CDK5RAP3Q96JB5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-1325P-201ENST00000364905 105 ntBASIC0.72□□□□□ -2.29
CDK5RAP3Q96JB5 MIR499A-201ENST00000384903 122 ntBASIC0.72□□□□□ -2.29
CDK5RAP3Q96JB5 AC244505.6-201ENST00000452829 130 ntBASIC0.72□□□□□ -2.29
CDK5RAP3Q96JB5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.72□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.659-201ENST00000515994 113 ntBASIC0.72□□□□□ -2.29
CDK5RAP3Q96JB5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.72□□□□□ -2.29
CDK5RAP3Q96JB5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CDK5RAP3Q96JB5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.709-201ENST00000516952 92 ntBASIC0.71□□□□□ -2.3
CDK5RAP3Q96JB5 MIR3613-201ENST00000579844 87 ntBASIC0.71□□□□□ -2.3
CDK5RAP3Q96JB5 SNORD115-24-201ENST00000363528 82 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 RNU4-36P-201ENST00000364294 144 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 RNU7-195P-201ENST00000458793 62 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 MIR4639-201ENST00000584938 69 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 AC092634.7-201ENST00000621022 103 ntBASIC0.7□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.163-201ENST00000363702 113 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.173-201ENST00000363776 113 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 SNORD28-201ENST00000384706 75 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 MIR516A2-201ENST00000384888 90 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 MIR516A1-201ENST00000385033 90 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 MIR599-201ENST00000385069 95 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 MIR1302-5-201ENST00000408164 150 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 AC097635.1-201ENST00000450678 155 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 RNU7-106P-201ENST00000459514 67 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 MIR6788-201ENST00000618842 66 ntBASIC0.69□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.10-201ENST00000362371 110 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.57-201ENST00000362806 113 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.809-201ENST00000516058 95 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 AC244669.1-204ENST00000621564 178 ntBASIC0.68□□□□□ -2.3
CDK5RAP3Q96JB5 Y_RNA.221-201ENST00000364248 96 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 RNU6-1163P-201ENST00000364516 107 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 RNA5SP517-201ENST00000364724 117 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 MIR519A1-201ENST00000385257 85 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 SNORA19.1-201ENST00000410656 129 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 AC109327.2-201ENST00000448339 378 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 RNA5SP47-201ENST00000517230 109 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 uc_338.28-201ENST00000612082 187 ntBASIC0.67□□□□□ -2.3
CDK5RAP3Q96JB5 SNORA36.1-201ENST00000363424 132 ntBASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 SNORD45B-201ENST00000364617 72 ntBASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 RNU6-106P-201ENST00000384405 107 ntBASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 RNU6-554P-201ENST00000410466 106 ntBASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CDK5RAP3Q96JB5 SNORD20-201ENST00000384550 80 ntBASIC0.65□□□□□ -2.31
CDK5RAP3Q96JB5 RNY4P18-201ENST00000391107 89 ntBASIC0.65□□□□□ -2.31
CDK5RAP3Q96JB5 Y_RNA.601-201ENST00000410500 113 ntBASIC0.65□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-86P-201ENST00000606534 107 ntBASIC0.65□□□□□ -2.31
CDK5RAP3Q96JB5 AC091304.10-201ENST00000641554 121 ntBASIC0.65□□□□□ -2.31
CDK5RAP3Q96JB5 SNORA8.2-201ENST00000384372 139 ntBASIC0.64□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-1254P-201ENST00000391266 104 ntBASIC0.64□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-904P-201ENST00000516206 101 ntBASIC0.64□□□□□ -2.31
CDK5RAP3Q96JB5 RNA5SP268-201ENST00000516828 124 ntBASIC0.64□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-1260P-201ENST00000362944 107 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 Y_RNA.78-201ENST00000362970 110 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-1125P-201ENST00000363601 107 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-215P-201ENST00000365169 102 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-480P-201ENST00000384332 107 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-243P-201ENST00000391140 107 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNU7-104P-201ENST00000459398 79 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNA5SP227-201ENST00000516184 113 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 RNU7-161P-201ENST00000517289 62 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 SNORA25.18-201ENST00000607153 114 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
CDK5RAP3Q96JB5 Y_RNA.95-201ENST00000363079 95 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 SNORA51.5-201ENST00000384126 131 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-524P-201ENST00000384270 107 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 SNORD71-201ENST00000411292 86 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-795P-201ENST00000516323 103 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 MIR4439-201ENST00000583746 80 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 MIR6828-201ENST00000636181 60 ntBASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CDK5RAP3Q96JB5 RNA5SP403-201ENST00000363598 108 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-1244P-201ENST00000363614 108 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-1113P-201ENST00000384348 107 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 MIR181B2-201ENST00000385004 89 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 MIR548L-201ENST00000408303 86 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 SCARNA23-201ENST00000516060 130 ntBASIC0.61□□□□□ -2.31
CDK5RAP3Q96JB5 RNU6-919P-201ENST00000516731 104 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 249.9 ms