Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.173-201ENST00000363776 113 ntBASIC1.18□□□□□ -2.22
RTF1Q92541 SNORD89-201ENST00000390981 114 ntBASIC1.18□□□□□ -2.22
RTF1Q92541 RNU6-168P-201ENST00000516189 101 ntBASIC1.18□□□□□ -2.22
RTF1Q92541 AP001318.4-201ENST00000616637 121 ntBASIC1.18□□□□□ -2.22
RTF1Q92541 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
RTF1Q92541 Y_RNA.96-201ENST00000363092 109 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 Y_RNA.107-201ENST00000363190 121 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
RTF1Q92541 RNU6-109P-201ENST00000516364 107 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 RNU6-184P-201ENST00000516514 107 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 AC025627.3-201ENST00000582078 182 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 AC013244.2-201ENST00000603396 103 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 MIR2052-201ENST00000636055 55 ntBASIC1.17□□□□□ -2.22
RTF1Q92541 MIR101-2-201ENST00000362195 79 ntBASIC1.16□□□□□ -2.22
RTF1Q92541 RNU6-1163P-201ENST00000364516 107 ntBASIC1.16□□□□□ -2.22
RTF1Q92541 SNORD105-201ENST00000386910 85 ntBASIC1.16□□□□□ -2.22
RTF1Q92541 RNA5SP255-201ENST00000516370 107 ntBASIC1.16□□□□□ -2.22
RTF1Q92541 MIR4698-201ENST00000577795 80 ntBASIC1.16□□□□□ -2.22
RTF1Q92541 Y_RNA.56-201ENST00000362798 112 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 Y_RNA.567-201ENST00000384736 106 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 RNA5SP89-201ENST00000410300 108 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 BX276092.1-201ENST00000427368 251 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 AC109327.2-201ENST00000448339 378 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 SNORA40.13-201ENST00000516379 120 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 MIR4777-201ENST00000583710 86 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 MIR151B-201ENST00000584249 96 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 AC008608.1-201ENST00000603910 127 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 RNU7-10P-201ENST00000607194 63 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 AC012531.4-201ENST00000616509 177 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 AC091304.10-201ENST00000641554 121 ntBASIC1.15□□□□□ -2.23
RTF1Q92541 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
RTF1Q92541 Y_RNA.348-201ENST00000365403 103 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 Y_RNA.374-201ENST00000365606 101 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 RNU6-795P-201ENST00000516323 103 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 Y_RNA.677-201ENST00000516401 85 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 Y_RNA.697-201ENST00000516776 113 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 RNU6-850P-201ENST00000516934 103 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 RNU6-448P-201ENST00000517052 107 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 MIR548H5-201ENST00000580314 60 ntBASIC1.14□□□□□ -2.23
RTF1Q92541 MIR520H-201ENST00000385126 88 ntBASIC1.13□□□□□ -2.23
RTF1Q92541 SNORD100-201ENST00000408573 76 ntBASIC1.13□□□□□ -2.23
RTF1Q92541 MTATP8P2-201ENST00000435212 202 ntBASIC1.13□□□□□ -2.23
RTF1Q92541 RNU6-1223P-201ENST00000517124 104 ntBASIC1.13□□□□□ -2.23
RTF1Q92541 RNU6-1244P-201ENST00000363614 108 ntBASIC1.12□□□□□ -2.23
RTF1Q92541 Y_RNA.536-201ENST00000384621 113 ntBASIC1.12□□□□□ -2.23
RTF1Q92541 RNU6-813P-201ENST00000384691 107 ntBASIC1.12□□□□□ -2.23
RTF1Q92541 Y_RNA.705-201ENST00000516862 110 ntBASIC1.12□□□□□ -2.23
RTF1Q92541 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
RTF1Q92541 RNU6-1125P-201ENST00000363601 107 ntBASIC1.11□□□□□ -2.23
RTF1Q92541 Y_RNA.342-201ENST00000365352 113 ntBASIC1.11□□□□□ -2.23
RTF1Q92541 RNU6-480P-201ENST00000384332 107 ntBASIC1.11□□□□□ -2.23
RTF1Q92541 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
RTF1Q92541 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
RTF1Q92541 RNU6-86P-201ENST00000606534 107 ntBASIC1.11□□□□□ -2.23
RTF1Q92541 Y_RNA.205-201ENST00000364128 113 ntBASIC1.1□□□□□ -2.23
RTF1Q92541 Y_RNA.467-201ENST00000384297 102 ntBASIC1.1□□□□□ -2.23
RTF1Q92541 MIR635-201ENST00000384830 98 ntBASIC1.1□□□□□ -2.23
RTF1Q92541 RNU6-972P-201ENST00000391208 107 ntBASIC1.1□□□□□ -2.23
RTF1Q92541 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
RTF1Q92541 MIR548Z-201ENST00000584743 97 ntBASIC1.1□□□□□ -2.23
RTF1Q92541 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
RTF1Q92541 RNU6-905P-201ENST00000384434 107 ntBASIC1.09□□□□□ -2.23
RTF1Q92541 RNU6-291P-201ENST00000384720 107 ntBASIC1.09□□□□□ -2.23
RTF1Q92541 RNU6-535P-201ENST00000384722 107 ntBASIC1.09□□□□□ -2.23
RTF1Q92541 CYP3A137P-201ENST00000562436 69 ntBASIC1.09□□□□□ -2.23
RTF1Q92541 Y_RNA.57-201ENST00000362806 113 ntBASIC1.08□□□□□ -2.24
RTF1Q92541 RNU6-640P-201ENST00000363693 105 ntBASIC1.08□□□□□ -2.24
RTF1Q92541 Y_RNA.174-201ENST00000363781 105 ntBASIC1.08□□□□□ -2.24
RTF1Q92541 RNU6-1335P-201ENST00000365426 107 ntBASIC1.08□□□□□ -2.24
RTF1Q92541 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RTF1Q92541 MIR519A1-201ENST00000385257 85 ntBASIC1.08□□□□□ -2.24
RTF1Q92541 AC002350.1-201ENST00000490759 375 ntBASIC1.08□□□□□ -2.24
RTF1Q92541 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
RTF1Q92541 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.07□□□□□ -2.24
RTF1Q92541 MIR573-201ENST00000384964 99 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 RNU6-644P-201ENST00000391155 98 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 RNU6-887P-201ENST00000410660 100 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 SNORD63B-201ENST00000411005 70 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 AC092628.1-201ENST00000436250 252 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 Y_RNA.694-201ENST00000516677 117 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 AC138907.6-201ENST00000568401 126 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 AC138869.1-201ENST00000568623 124 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.07□□□□□ -2.24
RTF1Q92541 Y_RNA.178-201ENST00000363832 102 ntBASIC1.06□□□□□ -2.24
RTF1Q92541 TRAJ51-201ENST00000504127 63 ntBASIC1.06□□□□□ -2.24
RTF1Q92541 RNU7-61P-201ENST00000515897 61 ntBASIC1.06□□□□□ -2.24
RTF1Q92541 PVT1_3.1-201ENST00000620853 95 ntBASIC1.06□□□□□ -2.24
RTF1Q92541 uc_338.16-201ENST00000621804 95 ntBASIC1.06□□□□□ -2.24
RTF1Q92541 SNORD114-2-201ENST00000363953 78 ntBASIC1.05□□□□□ -2.24
RTF1Q92541 MIR181B2-201ENST00000385004 89 ntBASIC1.05□□□□□ -2.24
RTF1Q92541 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
RTF1Q92541 AC103810.7-201ENST00000607821 91 ntBASIC1.05□□□□□ -2.24
RTF1Q92541 RNA5SP117-201ENST00000365294 118 ntBASIC1.04□□□□□ -2.24
RTF1Q92541 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RTF1Q92541 AC097635.1-201ENST00000450678 155 ntBASIC1.04□□□□□ -2.24
RTF1Q92541 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
RTF1Q92541 RNU6-351P-201ENST00000516097 100 ntBASIC1.04□□□□□ -2.24
RTF1Q92541 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms